RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ANKRD36A6QL64 1941 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 MIA3Q5JRA6 1907 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FAM221BA6H8Z2 402 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 CAPN8A6NHC0 703 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 SHISA7A6NL88 538 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 CXorf49A8MYA2 514 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 C1QTNF3-AMACRE9PGA6 284 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 POC1B-GALNT4F8VUJ3 575 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 AREL1O15033 823 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PFDN6O15212 129 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 STX7O15400 261 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 RGS16O15492 202 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 AP1G1O43747 822 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 GJB3O75712 270 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KRT37O76014 449 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KRT38O76015 456 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 INHBAP08476 426 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 C5AR1P21730 350 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PMLP29590 882 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 HNF1BP35680 557 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PPARGP37231 505 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 IL12RB1P42701 662 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 CSRP3P50461 194 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ZNF140P52738 457 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 EPHB1P54762 984 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 STARD6P59095 220 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 DCDC1P59894 354 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 XIAPP98170 497 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 SLC18A2Q05940 514 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ELP6Q0PNE2 266 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 THOC5Q13769 683 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 INSCQ1MX18 579 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TYSND1Q2T9J0 566 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KRT71Q3SY84 523 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 GPR33Q49SQ1 333 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TMEM52BQ4KMG9 183 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FNDC3BQ53EP0 1204 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 EOGTQ5NDL2 527 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 UBAP2Q5T6F2 1119 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 LYPLAL1Q5VWZ2 237 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 SDE2Q6IQ49 451 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FSTL4Q6MZW2 842 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 NEPROQ6NW34 567 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TRMT10BQ6PF06 316 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 CRTC1Q6UUV9 634 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PACS1Q6VY07 963 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 Q7L0L9 218 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TAOK1Q7L7X3 1001 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 GLT6D1Q7Z4J2 308 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TRABD2AQ86V40 505 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 EXOC3L1Q86VI1 746 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 LCA5Q86VQ0 697 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KCNMB4Q86W47 210 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KRT222Q8N1A0 295 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 LPCAT1Q8NF37 534 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 OR2T3Q8NH03 318 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 OR4L1Q8NH43 312 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 OR2W6PQ8NHA6 318 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ATXN2LQ8WWM7 1075 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 ASB12Q8WXK4 309 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 SORCS1Q8WY21 1168 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FAM3CQ92520 227 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ARL8AQ96BM9 186 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ZNF669Q96BR6 464 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 CFAP36Q96G28 342 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PPP1R16AQ96I34 528 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 CABS1Q96KC9 395 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 EXOC2Q96KP1 924 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TBATAQ96M53 351 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ZNF778Q96MU6 729 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KLHL32Q96NJ5 620 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PLEKHG4BQ96PX9 1271 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 PAFAH2Q99487 392 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FAM167BQ9BTA0 163 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 RSPH9Q9H1X1 276 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 CD248Q9HCU0 757 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 C20orf96Q9NUD7 363 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 MKS1Q9NXB0 559 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 PSMC3IPQ9P2W1 217 aaPredicted RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 APPL1Q9UKG1 709 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 FBXO5Q9UKT4 447 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 SORCS3Q9UPU3 1222 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 MRPS17Q9Y2R5 130 aaKnown RBP5.45□□□□□ -1.54
VPS41-211ENST00000466017 MSRB2Q9Y3D2 182 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 SPO11Q9Y5K1 396 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 COMMD10Q9Y6G5 202 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 IKBKGQ9Y6K9 419 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 STON1Q9Y6Q2 735 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 KIAA1549LQ6ZVL6 1849 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 COL4A2P08572 1712 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 BRWD1Q9NSI6 2320 aa5.45□□□□□ -1.54
VPS41-211ENST00000466017 TRIOBPQ9H2D6 2365 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TRBV5-4A0A0C4DH59 114 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TLDC2A0PJX2 215 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CCDC189A1A4V9 331 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 C16orf96A6NNT2 1141 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 C10orf142B7Z368 130 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms