RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 RPS9P46781 194 aaKnown RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 HTR6P50406 440 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 C18orf21Q32NC0 220 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 GLYATQ6IB77 296 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 PRR23BQ6ZRT6 265 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 LYSMD3Q7Z3D4 306 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 ERI1Q8IV48 349 aaKnown RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 DPP10Q8N608 796 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 BIRC7Q96CA5 298 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 PPM1MQ96MI6 270 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 CIPCQ9C0C6 399 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 RNF38Q9H0F5 515 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 USP22Q9UPT9 525 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 FADS3Q9Y5Q0 445 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 CASP8AP2Q9UKL3 1982 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 GUCA1CO95843 209 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 MZF1P28698 734 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 RGS4P49798 205 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 AP5B1Q2VPB7 878 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 LRRC23Q53EV4 343 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 INO80DQ53TQ3 878 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 KIAA1841Q6NSI8 718 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 CYP20A1Q6UW02 462 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 ABRAXAS1Q6UWZ7 409 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 FBXL20Q96IG2 436 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 TSEN34Q9BSV6 310 aaKnown RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 CHID1Q9BWS9 393 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 IPPKQ9H8X2 491 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 MTRRQ9UBK8 725 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 LHX3Q9UBR4 397 aa18.06■□□□□ 0.48
SYNE4-204ENST00000465425 FCF1Q9Y324 198 aaKnown RBP18.06■□□□□ 0.48
SYNE4-204ENST00000465425 ANKRD33BA6NCL7 494 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 LSM1O15116 133 aaKnown RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 TBL1XO60907 577 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 GMNNO75496 209 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 CLIC3O95833 236 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 HMGA1P17096 107 aaKnown RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 CAPGP40121 348 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 OR4D2P58180 307 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ATXN7L2Q5T6C5 722 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ARMC12Q5T9G4 340 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 SBSNQ6UWP8 590 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 FAM151BQ6UXP7 276 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ZNF783Q6ZMS7 281 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 MILR1Q7Z6M3 343 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 RALGPS2Q86X27 583 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 SLC43A3Q8NBI5 491 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 MAGEE1Q9HCI5 957 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 POLR3HQ9Y535 204 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 C2orf78A6NCI8 922 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ARVCFO00192 962 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 IFRD1O00458 451 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 OR7A17O14581 309 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 PRAMEF1O95521 474 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ALPIP09923 528 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 HRH2P25021 359 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ALDH7A1P49419 539 aaKnown RBP18.05■□□□□ 0.48
SYNE4-204ENST00000465425 MTPNP58546 118 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 SP3Q02447 781 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 MYO19Q96H55 970 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 EGFL8Q99944 293 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ZMYM5Q9UJ78 669 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 ANGPTL3Q9Y5C1 460 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 PCDHB3Q9Y5E6 796 aa18.05■□□□□ 0.48
SYNE4-204ENST00000465425 SCAMP3O14828 347 aaKnown RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 FZD6O60353 706 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 PRAMEF12O95522 483 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 ITGB6P18564 788 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 PLD1Q13393 1074 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 BFSP2Q13515 415 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 ABRAXAS2Q15018 415 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 PATL1Q86TB9 770 aaKnown RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 SERPINA9Q86WD7 417 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 OFCC1Q8IZS5 231 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 WBP2Q969T9 261 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 ISG20Q96AZ6 181 aaKnown RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 CGREF1Q99674 301 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 FEM1AQ9BSK4 669 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 NSUN3Q9H649 340 aaKnown RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 GNPTGQ9UJJ9 305 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 ZFC3H1O60293 1989 aaKnown RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 ARNTLO00327 626 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 HSPA7P48741 367 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 CDH18Q13634 790 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 FXNQ16595 210 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 RFTN2Q52LD8 501 aaPredicted RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 DLEU7Q6UYE1 221 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 RBFAQ8N0V3 343 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 EID2BQ96D98 161 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 PPP3R2Q96LZ3 170 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 APOL5Q9BWW9 433 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 KLF16Q9BXK1 252 aaPredicted RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 FAM126AQ9BYI3 521 aaPredicted RBP18.04■□□□□ 0.48
SYNE4-204ENST00000465425 TM6SF2Q9BZW4 377 aa18.04■□□□□ 0.48
SYNE4-204ENST00000465425 TULP3O75386 442 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 SEC24AO95486 1093 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 CDH1P12830 882 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 DGKQP52824 942 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 PLIN5Q00G26 463 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms