RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CTAGE8P0CG41 777 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 ALDH4A1P30038 563 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC19A1P41440 591 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 ELK3P41970 407 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 HALP42357 657 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CLDN6P56747 220 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 OR1D5P58170 312 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CCL7P80098 99 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 HHEXQ03014 270 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 THOC5Q13769 683 aaKnown RBP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 NR1D2Q14995 579 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CLCA4Q14CN2 919 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 HP1BP3Q5SSJ5 553 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CDCP2Q5VXM1 449 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 C8orf74Q6P047 294 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 SPRED1Q7Z699 444 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CTAGE6Q86UF2 777 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 IGDCC3Q8IVU1 814 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CTAGE4Q8IX94 777 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CACTIN-AS1Q8N1I8 211 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 MMGT1Q8N4V1 131 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 HM13Q8TCT9 377 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 SH3KBP1Q96B97 665 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 LRRC39Q96DD0 335 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 TCF12Q99081 682 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC38A3Q99624 504 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 LRRC1Q9BTT6 524 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 LRRN3Q9H3W5 708 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 C20orf96Q9NUD7 363 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 IL1RAPL1Q9NZN1 696 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF624Q9P2J8 865 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 KLK13Q9UKR3 277 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 PSMD13Q9UNM6 376 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 CLCA2Q9UQC9 943 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 NEUROG3Q9Y4Z2 214 aa14.23□□□□□ -0.13
SQSTM1-205ENST00000464493 UNC13CQ8NB66 2214 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 FAM149AA5PLN7 773 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 OR52A4PA6NMU1 304 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 NTN3O00634 580 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 CASC3O15234 703 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 TCEA3O75764 348 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 VIPP01282 170 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 RPLP0P05388 317 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 OGNP20774 298 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 UBE2IP63279 158 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC7A5Q01650 507 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 PDIA2Q13087 525 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 SPIDRQ14159 915 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 CRYMQ14894 314 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 TYSND1Q2T9J0 566 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 SPANXN3Q5MJ09 141 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 RNF187Q5TA31 235 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF449Q6P9G9 518 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 XKR5Q6UX68 686 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 CCNI2Q6ZMN8 369 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 LRRC6Q86X45 466 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 MARCH9Q86YJ5 346 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 CILP2Q8IUL8 1156 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 TRIM48Q8IWZ4 208 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 LILRA3Q8N6C8 439 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 CXorf40BQ96DE9 158 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 WWP1Q9H0M0 922 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 SYNDIG1Q9H7V2 258 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 COG4Q9H9E3 785 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 GRHL1Q9NZI5 618 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 ZC3H7BQ9UGR2 993 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 TEX264Q9Y6I9 313 aa14.22□□□□□ -0.13
SQSTM1-205ENST00000464493 A0A1W2PQM1 296 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 UBA6A0AVT1 1052 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 E7ESA3 106 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 SLC35G4P0C7Q5 338 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 RPS3P23396 243 aaKnown RBP eCLIP14.21□□□□□ -0.133e-7■■■□□ 15.2
SQSTM1-205ENST00000464493 PLTPP55058 493 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CAV1Q03135 178 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 TARDBPQ13148 414 aaKnown RBP eCLIP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 RPA4Q13156 261 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CBLBQ13191 982 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 TRADDQ15628 312 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 RPE65Q16518 533 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 AMZ1Q400G9 498 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF658BQ4V348 819 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 HSP90AA5PQ58FG0 334 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF470Q6ECI4 717 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 PTRHD1Q6GMV3 140 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 RBM44Q6ZP01 1051 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CENPUQ71F23 418 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 ZNF761Q86XN6 746 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 ANKMY2Q8IV38 441 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 LMNTD2Q8IXW0 634 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CEP112Q8N8E3 955 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 DCBLD1Q8N8Z6 715 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 ELMO1Q92556 727 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 ART4Q93070 314 aa14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 GFM1Q96RP9 751 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 INSM2Q96T92 566 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-205ENST00000464493 CARD6Q9BX69 1037 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms