RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 MAGEE1Q9HCI5 957 aa22.77■■□□□ 1.24
SSNA1-203ENST00000463511 SLC40A1Q9NP59 571 aa22.77■■□□□ 1.24
SSNA1-203ENST00000463511 RAD18Q9NS91 495 aa22.77■■□□□ 1.24
SSNA1-203ENST00000463511 MAN2B2Q9Y2E5 1009 aa22.77■■□□□ 1.24
SSNA1-203ENST00000463511 CDC14CA4D256 554 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 BPIP17213 487 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 XRCC4Q13426 336 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 ABRAXAS1Q6UWZ7 409 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 FAM26EQ8N5C1 309 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 TEX19Q8NA77 164 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 CXorf40BQ96DE9 158 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 KCND3Q9UK17 655 aa22.76■■□□□ 1.23
SSNA1-203ENST00000463511 SPTBN1Q01082 2364 aaKnown RBP22.76■■□□□ 1.23
SSNA1-203ENST00000463511 VEGFDO43915 354 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 SPAG6O75602 509 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 RFPL1O75677 317 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 CDK14O94921 469 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 FGF5P12034 268 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 MLLT10P55197 1068 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 PPP1CAP62136 330 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 TCTN3Q6NUS6 607 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 ASB18Q6ZVZ8 466 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 TRAPPC5Q8IUR0 188 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 TFB1MQ8WVM0 346 aaKnown RBP22.75■■□□□ 1.23
SSNA1-203ENST00000463511 KLHL6Q8WZ60 621 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 TRIM44Q96DX7 344 aaPredicted RBP22.75■■□□□ 1.23
SSNA1-203ENST00000463511 ZDHHC12Q96GR4 267 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 FAM118BQ9BPY3 351 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 TWSG1Q9GZX9 223 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 TMPRSS11EQ9UL52 423 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 R3HDM2Q9Y2K5 976 aaKnown RBP22.75■■□□□ 1.23
SSNA1-203ENST00000463511 ZKSCAN5Q9Y2L8 839 aa22.75■■□□□ 1.23
SSNA1-203ENST00000463511 HACD1B0YJ81 288 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 AURKAO14965 403 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 CEP104O60308 925 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 TIAF1O95411 115 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 NTRK1P04629 796 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 CCNYL3P0C7X3 344 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 IDSP22304 550 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 CDK18Q07002 472 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 DNASE1L3Q13609 305 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 AGAP9Q5VTM2 703 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 PPP1R3BQ86XI6 285 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 TTC13Q8NBP0 860 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 SPATA22Q8NHS9 363 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 PBKQ96KB5 322 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 QKIQ96PU8 341 aaKnown RBP eCLIP22.74■■□□□ 1.23
SSNA1-203ENST00000463511 BPIFA1Q9NP55 256 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 TLK1Q9UKI8 766 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 WDR37Q9Y2I8 494 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 SPO11Q9Y5K1 396 aa22.74■■□□□ 1.23
SSNA1-203ENST00000463511 MED13Q9UHV7 2174 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 PIPSLA2A3N6 862 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 H7C0C1 242 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 CREG1O75629 220 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 MT-CYBP00156 380 aaPredicted RBP22.73■■□□□ 1.23
SSNA1-203ENST00000463511 NELFEP18615 380 aaKnown RBP22.73■■□□□ 1.23
SSNA1-203ENST00000463511 ATP5OP48047 213 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 CD97P48960 835 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 PMS2P54278 862 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 EIF3EP60228 445 aaKnown RBP22.73■■□□□ 1.23
SSNA1-203ENST00000463511 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.73■■□□□ 1.23
SSNA1-203ENST00000463511 ATP13A5Q4VNC0 1218 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 WASH2PQ6VEQ5 465 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 C11orf96Q7Z7L8 435 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 ATCAYQ86WG3 371 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 RBM12BQ8IXT5 1001 aaKnown RBP22.73■■□□□ 1.23
SSNA1-203ENST00000463511 CT55Q8WUE5 264 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 TADA1Q96BN2 335 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 VPS35Q96QK1 796 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 OSBPL9Q96SU4 736 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 SLC25A51Q9H1U9 297 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 C10orf88Q9H8K7 445 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 LHX9Q9NQ69 397 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 WASH6PQ9NQA3 447 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 EPHA6Q9UF33 1036 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 PADI1Q9ULC6 663 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 SNX12Q9UMY4 172 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 PCDHGA6Q9Y5G7 932 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 ICE1Q9Y2F5 2266 aa22.73■■□□□ 1.23
SSNA1-203ENST00000463511 FANCGO15287 622 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 DNAJB5O75953 348 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 RBP3P10745 1247 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 TUBB3Q13509 450 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 KCNAB1Q14722 419 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 SIX1Q15475 284 aaPredicted RBP22.72■■□□□ 1.23
SSNA1-203ENST00000463511 RASGEF1CQ8N431 466 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 GPR150Q8NGU9 434 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 GDAP1Q8TB36 358 aa22.72■■□□□ 1.23
SSNA1-203ENST00000463511 RP1L1Q8IWN7 2480 aaPredicted RBP22.72■■□□□ 1.23
SSNA1-203ENST00000463511 NBPF19A0A087WUL8 3843 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 IGHV5-51A0A0C4DH38 117 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 PMPCBO75439 489 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 NDST3O95803 873 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 FGGP02679 453 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 MT-ND3P03897 115 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 PDGFAP04085 211 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 VCLP18206 1134 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 RBL1P28749 1068 aa22.71■■□□□ 1.23
SSNA1-203ENST00000463511 HALP42357 657 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms