RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 NDUFS1P28331 727 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 FOXN2P32314 431 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 CSE1LP55060 971 aaKnown RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 INHBCP55103 352 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 EIF3BP55884 814 aaKnown RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 GPLD1P80108 840 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 SHC2P98077 582 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 CAV1Q03135 178 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 BOP1Q14137 746 aaKnown RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 SNAP47Q5SQN1 464 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 AGAP9Q5VTM2 703 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 METRNLQ641Q3 311 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 C8orf74Q6P047 294 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 ABRAXAS1Q6UWZ7 409 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 WASH2PQ6VEQ5 465 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 CCNI2Q6ZMN8 369 aaPredicted RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 CENPUQ71F23 418 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 SPRED1Q7Z699 444 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 CTAGE6Q86UF2 777 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 CAND1Q86VP6 1230 aaKnown RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 ZNF761Q86XN6 746 aaPredicted RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 ZNF547Q8IVP9 402 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 CTAGE4Q8IX94 777 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 PALM2Q8IXS6 379 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 PIANPQ8IYJ0 282 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 SFRP1Q8N474 314 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.39□□□□□ -0.91
PKP4-208ENST00000462335 ASZ1Q8WWH4 475 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 MFSD3Q96ES6 412 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 ZNF778Q96MU6 729 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 FOPNLQ96NB1 174 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 ERP44Q9BS26 406 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 EPB41L1Q9H4G0 881 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 POT1Q9NUX5 634 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 ZFC3H1O60293 1989 aaKnown RBP9.39□□□□□ -0.91
PKP4-208ENST00000462335 KNTC1P50748 2209 aa9.39□□□□□ -0.91
PKP4-208ENST00000462335 UNC13CQ8NB66 2214 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 SCN8AQ9UQD0 1980 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 TRBV5-4A0A0C4DH59 114 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LY6G6EA0A0G2JKS1 128 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 TRABD2BA6NFA1 517 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 OR52A4PA6NMU1 304 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 AGAP14A8MT82 685 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 AGRPO00253 132 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LIN7AO14910 233 aaPredicted RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 PPM1DO15297 605 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 OR1I1O60431 355 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 RASSF9O75901 435 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 USP1O94782 785 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 TMEM63AO94886 807 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 UBXN7O94888 489 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 RPN2P04844 631 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 JMJD7P0C870 316 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 TYRP1P17643 537 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 FMO4P31512 558 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 CSTF2P33240 577 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■■■□ 21.8
PKP4-208ENST00000462335 FASLGP48023 281 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 PRLHRP49683 370 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 ARL4DP49703 201 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 MRPS25P82663 173 aaKnown RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 ACVR1Q04771 509 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 DMPKQ09013 629 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 HSPA14Q0VDF9 509 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 PDIA2Q13087 525 aaKnown RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 PRKAA1Q13131 559 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 RPA4Q13156 261 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 RPE65Q16518 533 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 SPANXN3Q5MJ09 141 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 TMEM164Q5U3C3 297 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 NKAIN2Q5VXU1 208 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 ZNF470Q6ECI4 717 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 KIAA0930Q6ICG6 404 aaPredicted RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 PACS1Q6VY07 963 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 CEP128Q6ZU80 1094 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 OTOAQ7RTW8 1153 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LDB1Q86U70 411 aaPredicted RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 CCDC25Q86WR0 208 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 PLXDC1Q8IUK5 500 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 SFTPA2Q8IWL1 248 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LMNTD2Q8IXW0 634 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LSMEM2Q8N112 164 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 RAB42Q8N4Z0 105 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 CEP112Q8N8E3 955 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LRRC39Q96DD0 335 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 NXPE2Q96DL1 559 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 ZDHHC12Q96GR4 267 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 SGSM3Q96HU1 749 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 LINC00615Q96LM1 132 aaPredicted RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 CMKLR1Q99788 373 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 EBNA1BP2Q99848 306 aaKnown RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 FAM167BQ9BTA0 163 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 FOXP3Q9BZS1 431 aa9.38□□□□□ -0.91
PKP4-208ENST00000462335 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
PKP4-208ENST00000462335 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms