RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KCNK5O95279 499 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SIX3O95343 332 aaPredicted RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 LINC00271P0C7V0 271 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 FAM106CPP0CH98 169 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 TKTP29401 623 aaKnown RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 ARRB2P32121 409 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 MC5RP33032 325 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 HSPA4P34932 840 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SLC9A3P48764 834 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 LIMK1P53667 647 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SCN1BQ07699 218 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 UBE2V1Q13404 147 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 TWISTNBQ3B726 338 aaPredicted RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 GCNT6Q5T4J0 391 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 C9orf47Q6ZRZ4 202 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 Q75L30 129 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 DET1Q7L5Y6 550 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 C1orf87Q8N0U7 546 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 IQCF1Q8N6M8 205 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 RBMXL3Q8N7X1 1067 aaKnown RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 PI4KAP1Q8N8J0 262 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 IQUBQ8NA54 791 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 CAMKVQ8NCB2 501 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 CLEC18CQ8NCF0 446 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 ACVR1CQ8NER5 493 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 WDR20Q8TBZ3 569 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SLC38A5Q8WUX1 472 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 ROBO4Q8WZ75 1007 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SMPDL3BQ92485 455 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 MIB2Q96AX9 1013 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 RHBDF1Q96CC6 855 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 CDCA5Q96FF9 252 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SIPA1Q96FS4 1042 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 TMEM19Q96HH6 336 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 C3orf30Q96M34 536 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF48Q96MX3 618 aaPredicted RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 OR6C1Q96RD1 312 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 FNBP1Q96RU3 617 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 CMKLR1Q99788 373 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 CITED2Q99967 270 aaPredicted RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 FERMT1Q9BQL6 677 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 NAA11Q9BSU3 229 aaPredicted RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 SYT17Q9BSW7 474 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 GPR88Q9GZN0 384 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 PPIL3Q9H2H8 161 aaKnown RBP2.95□□□□□ -1.94
HDAC6-212ENST00000461608 EBF3Q9H4W6 596 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 NOX4Q9NPH5 578 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 WWOXQ9NZC7 414 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 YIPF1Q9Y548 306 aa2.95□□□□□ -1.94
HDAC6-212ENST00000461608 A0A087WV48 116 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 MED19A0JLT2 244 aaPredicted RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 OR2M5A3KFT3 312 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 URADA6NGE7 173 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ANXA2P2A6NMY6 339 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 H0Y626 953 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 MID1O15344 667 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ZNHIT1O43257 154 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 STX6O43752 255 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 GPR137BO60478 399 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 WDR1O75083 606 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ZWINTO95229 277 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 RAB40ALP0C0E4 278 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 DANCRP0C864 163 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 SSTR2P30874 369 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 CORO1AP31146 461 aaKnown RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 AHRP35869 848 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 CCR10P46092 362 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ASCL1P50553 236 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 TERF1P54274 439 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 TUBA1BP68363 451 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 IRX6P78412 446 aaPredicted RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 PPP2R2BQ00005 443 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF155Q12901 538 aaPredicted RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 MYBPHQ13203 477 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 SNTA1Q13424 505 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 CAMK2DQ13557 499 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ASPRV1Q53RT3 343 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 PAPPA-AS1Q5QFB9 102 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ARMC3Q5W041 872 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF549Q6P9A3 640 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 FAM198BQ6UWH4 519 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 LINGO4Q6UY18 593 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 SFR1Q86XK3 245 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 KMT5CQ86Y97 462 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 MAP7D3Q8IWC1 876 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 GPALPP1Q8IXQ4 340 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 TIGD4Q8IY51 512 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 CCAR2Q8N163 923 aaKnown RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 NEXN-AS1Q8NBZ9 246 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF114Q8NC26 417 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 OR5R1Q8NH85 324 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 TAS1R2Q8TE23 839 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 RND1Q92730 232 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 PHF21AQ96BD5 680 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 MOB3AQ96BX8 217 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ABHD8Q96I13 439 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 ADGRG7Q96K78 797 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 FAM84BQ96KN1 310 aaPredicted RBP2.94□□□□□ -1.94
HDAC6-212ENST00000461608 FER1L6-AS2Q96M78 137 aa2.94□□□□□ -1.94
HDAC6-212ENST00000461608 LMF2Q9BU23 707 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms