RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 ALDH4A1P30038 563 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 PBLDP30039 288 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 CCKBRP32239 447 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 SLC19A1P41440 591 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 ARCN1P48444 511 aaKnown RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 DRG2P55039 364 aaKnown RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 OR1D5P58170 312 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 CKAP4Q07065 602 aaKnown RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 RPA4Q13156 261 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 SEMA3AQ14563 771 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 RTP5Q14D33 572 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 SEPT7Q16181 437 aaKnown RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 TYSND1Q2T9J0 566 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 ANKRD20A4Q4UJ75 823 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 DNAJC21Q5F1R6 531 aaKnown RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 RNF187Q5TA31 235 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 MRNIPQ6NTE8 343 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 HIBCHQ6NVY1 386 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 CASC4Q6P4E1 433 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 XKR5Q6UX68 686 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 TMEM26Q6ZUK4 368 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 LRRC6Q86X45 466 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 TRIM48Q8IWZ4 208 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 PDIK1LQ8N165 341 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 Q8N9G6 341 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 BBOF1Q8ND07 529 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 GPR150Q8NGU9 434 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 OR10G6Q8NH81 332 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 NAT14Q8WUY8 206 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 NXPE2Q96DL1 559 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 LIN37Q96GY3 246 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 TMEM74Q96NL1 305 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 TCF12Q99081 682 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 CCM2Q9BSQ5 444 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 NAT9Q9BTE0 207 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 SYNDIG1Q9H7V2 258 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 COG4Q9H9E3 785 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 KCNK4Q9NYG8 393 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 MARCH4Q9P2E8 410 aaPredicted RBP8.33□□□□□ -1.08
SP140-207ENST00000456542 WDR37Q9Y2I8 494 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 ENTPD2Q9Y5L3 495 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 MAD1L1Q9Y6D9 718 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 RPS6KL1Q9Y6S9 549 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 SPEGQ15772 3267 aa8.33□□□□□ -1.08
SP140-207ENST00000456542 CEP295Q9C0D2 2601 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CCDC187A0A096LP49 1063 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 TRABD2BA6NFA1 517 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 OR52A4PA6NMU1 304 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 LIN7AO14910 233 aaPredicted RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 CASC3O15234 703 aaKnown RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 TP73O15350 636 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 DUX1O43812 170 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 OR1I1O60431 355 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 TTC4O95801 387 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 POLBP06746 335 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 C1QTNF9P0C862 333 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 MTHFD1P11586 935 aaKnown RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 PGAM1P18669 254 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 RPS3P23396 243 aaKnown RBP eCLIP8.32□□□□□ -1.08
SP140-207ENST00000456542 NDUFS1P28331 727 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CD1CP29017 333 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CD151P48509 253 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 ITGA8P53708 1063 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 INHBCP55103 352 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 ADARP55265 1226 aaKnown RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 PLOD1Q02809 727 aaPredicted RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 C2orf54Q08AI8 447 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CBLBQ13191 982 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 EIF3IQ13347 325 aaKnown RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 TRA2AQ13595 282 aaKnown RBP eCLIP8.32□□□□□ -1.08
SP140-207ENST00000456542 TUBB2AQ13885 445 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CLCA4Q14CN2 919 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 RPE65Q16518 533 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 WHAMMP3Q1A5X7 153 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 MAP9Q49MG5 647 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CAPRIN2Q6IMN6 1127 aaKnown RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 ZNF449Q6P9G9 518 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 IGF2-ASQ6U949 168 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 PIM3Q86V86 326 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 ZNF761Q86XN6 746 aaPredicted RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 MARCH9Q86YJ5 346 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 SLITRK4Q8IW52 837 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CFAP206Q8IYR0 622 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 AGGF1Q8N302 714 aaeCLIP8.32□□□□□ -1.08
SP140-207ENST00000456542 CALML6Q8TD86 181 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 ZFPM2Q8WW38 1151 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 SLC39A7Q92504 469 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 TMEM159Q96B96 161 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 ZNF669Q96BR6 464 aaPredicted RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 LRRC39Q96DD0 335 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 CXorf40BQ96DE9 158 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 STAMBPL1Q96FJ0 436 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 RMDN2Q96LZ7 410 aa8.32□□□□□ -1.08
SP140-207ENST00000456542 FCRL3Q96P31 734 aaPredicted RBP8.32□□□□□ -1.08
SP140-207ENST00000456542 PANX3Q96QZ0 392 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms