RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CHRNA4P43681 627 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 OTUD4Q01804 1114 aaKnown RBP21.28■■□□□ 1
C9orf3-208ENST00000451893 TMEM115Q12893 351 aaPredicted RBP21.28■■□□□ 1
C9orf3-208ENST00000451893 SNX1Q13596 522 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 PTK6Q13882 451 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 PPP1R7Q15435 360 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 OASLQ15646 514 aaKnown RBP21.28■■□□□ 1
C9orf3-208ENST00000451893 SLC1A5Q15758 541 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 ATP13A5Q4VNC0 1218 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 LDLRAP1Q5SW96 308 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 FBXO38Q6PIJ6 1188 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 KDELC1Q6UW63 502 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 CEACAM20Q6UY09 585 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 BBOF1Q8ND07 529 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 ATG4AQ8WYN0 398 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 MRGPRX2Q96LB1 330 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 PCDHGA4Q9Y5G9 962 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 PCDHGA3Q9Y5H0 932 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 SDK2Q58EX2 2172 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 LILRA5A6NI73 299 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 CHUKO15111 745 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 ATP8B1O43520 1251 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 BUD23O43709 281 aaKnown RBP21.27■■□□□ 1
C9orf3-208ENST00000451893 TYRP1P17643 537 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 KCNJ1P48048 391 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 ANKS6Q68DC2 871 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 EMBQ6PCB8 327 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 DARS2Q6PI48 645 aaKnown RBP21.27■■□□□ 1
C9orf3-208ENST00000451893 PCSK4Q6UW60 755 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 CACNA2D3Q8IZS8 1091 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 KIAA1143Q96AT1 154 aaPredicted RBP21.27■■□□□ 1
C9orf3-208ENST00000451893 MED8Q96G25 268 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 OXNAD1Q96HP4 312 aaPredicted RBP21.27■■□□□ 1
C9orf3-208ENST00000451893 FICDQ9BVA6 458 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 GBA3Q9H227 469 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 POT1Q9NUX5 634 aa21.27■■□□□ 1
C9orf3-208ENST00000451893 A6NCN8 305 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 C2orf81A6NN90 581 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 PPFIA2O75334 1257 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 RASSF9O75901 435 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 UBXN7O94888 489 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 XRCC1P18887 633 aaPredicted RBP21.26■□□□□ 0.99
C9orf3-208ENST00000451893 MSH3P20585 1137 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 EIF3EP60228 445 aaKnown RBP21.26■□□□□ 0.99
C9orf3-208ENST00000451893 FOXM1Q08050 763 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 TMEM26Q6ZUK4 368 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 GSTA5Q7RTV2 222 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 DTX1Q86Y01 620 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 EXTL1Q92935 676 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 CTRCQ99895 268 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 SLC23A2Q9UGH3 650 aa21.26■□□□□ 0.99
C9orf3-208ENST00000451893 AAR2Q9Y312 384 aaKnown RBP21.26■□□□□ 0.99
C9orf3-208ENST00000451893 HEMK1Q9Y5R4 338 aaPredicted RBP21.26■□□□□ 0.99
C9orf3-208ENST00000451893 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-208ENST00000451893 KCNN4O15554 427 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 RAD1O60671 282 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 PBLDP30039 288 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A3P35503 534 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 UBE2IP63279 158 aaKnown RBP21.25■□□□□ 0.99
C9orf3-208ENST00000451893 CAV1Q03135 178 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 CHRNA6Q15825 494 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 C4orf22Q6V702 233 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 AMZ2Q86W34 360 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 IFT81Q8WYA0 676 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 PMEPA1Q969W9 287 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 TGM7Q96PF1 710 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 PPP1R2P1Q96PQ5 205 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 ZPBPQ9BS86 351 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 C10orf88Q9H8K7 445 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 UCK1Q9HA47 277 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 IL26Q9NPH9 171 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 SCHIP1Q9P0W5 487 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-208ENST00000451893 WHRNQ9P202 907 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 NEU2Q9Y3R4 380 aa21.25■□□□□ 0.99
C9orf3-208ENST00000451893 POLR1CO15160 346 aaPredicted RBP21.24■□□□□ 0.99
C9orf3-208ENST00000451893 KCNJ13O60928 360 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 ITGB2P05107 769 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 RBP3P10745 1247 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 MRPS25P82663 173 aaKnown RBP21.24■□□□□ 0.99
C9orf3-208ENST00000451893 PLCL1Q15111 1095 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 BEND6Q5SZJ8 279 aaPredicted RBP21.24■□□□□ 0.99
C9orf3-208ENST00000451893 RBM12BQ8IXT5 1001 aaKnown RBP21.24■□□□□ 0.99
C9orf3-208ENST00000451893 TTC30BQ8N4P2 665 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 NKD1Q969G9 470 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 FAM117AQ9C073 453 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 TSPYL1Q9H0U9 437 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 IL17CQ9P0M4 197 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 PDP2Q9P2J9 529 aa21.24■□□□□ 0.99
C9orf3-208ENST00000451893 MGAQ8IWI9 3026 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 OR2AG2A6NM03 316 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 OR52A4PA6NMU1 304 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A9O60656 530 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 AGTP01019 485 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 KRT14P02533 472 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A6P19224 532 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 LPOP22079 712 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A1P22309 533 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A4P22310 534 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 SLC19A1P41440 591 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 CARSP49589 748 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms