RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RHOXF1Q8NHV9 184 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 UTP15Q8TED0 518 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CHURC1Q8WUH1 139 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NELL1Q92832 810 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NKD2Q969F2 451 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 MUL1Q969V5 352 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SCRN2Q96FV2 425 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TRNT1Q96Q11 434 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 MCMBPQ9BTE3 642 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NFKBIZQ9BYH8 718 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 POMKQ9H5K3 350 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ARMC7Q9H6L4 198 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC52A2Q9HAB3 445 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 KCNMB3Q9NPA1 279 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 KCNQ5Q9NR82 932 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BLOC1S4Q9NUP1 217 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DTLQ9NZJ0 730 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CD274Q9NZQ7 290 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 AFF4Q9UHB7 1163 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 KIAA1257Q9ULG3 409 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CLEC4AQ9UMR7 237 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PXDNQ92626 1479 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MYH7P12883 1935 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM149AA5PLN7 773 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR2AT4A6NND4 320 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 M0QZK8 103 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TOR1AO14656 332 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CASKO14936 926 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PGRMC2O15173 223 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OGTO15294 1046 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CAPN5O15484 640 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 HOXA2O43364 376 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TLR5O60602 858 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GGCTO75223 188 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF780AO75290 641 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 BCAS1O75363 584 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CPNE6O95741 557 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GUCA1CO95843 209 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TSPAN12O95859 305 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CALCAP01258 141 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CHRNGP07510 517 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SPARCP09486 303 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DLDP09622 509 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 PPP3CBP16298 524 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HK1P19367 917 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CYP2A7P20853 494 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LHCGRP22888 699 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RGS4P49798 205 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NAGLUP54802 743 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 AIF1P55008 147 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TIMM10P62072 90 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CNTN1Q12860 1018 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DPYSL3Q14195 570 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 EIF4HQ15056 248 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 NPTX1Q15818 432 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CDONQ4KMG0 1287 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ARHGAP15Q53QZ3 475 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 XKR9Q5GH70 373 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TEX30Q5JUR7 227 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 AKR1C8PQ5T2L2 129 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM69AQ5T7M9 428 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ATF7IP2Q5U623 682 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RNF219Q5W0B1 726 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC22A10Q63ZE4 541 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ABLIM2Q6H8Q1 611 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DESI1Q6ICB0 168 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF746Q6NUN9 644 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 KDELC1Q6UW63 502 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ANKS3Q6ZW76 656 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PRSS42Q7Z5A4 293 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DPPA2Q7Z7J5 298 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM160B2Q86V87 743 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 IQCHQ86VS3 1027 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC34A3Q8N130 599 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 VGLL2Q8N8G2 317 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C12orf29Q8N999 325 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ACBD4Q8NC06 268 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MOSPD2Q8NHP6 518 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DENND1AQ8TEH3 1009 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC7A3Q8WY07 619 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM89AQ96GI7 184 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CCDC120Q96HB5 630 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ITCHQ96J02 903 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MCEEQ96PE7 176 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC9A7Q96T83 725 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SEPHS2Q99611 448 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MAPKAP1Q9BPZ7 522 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PBDC1Q9BVG4 233 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C2orf40Q9H1Z8 148 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PPIL3Q9H2H8 161 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CRISPLD1Q9H336 500 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ATXN3LQ9H3M9 355 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ALG2Q9H553 416 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF408Q9H9D4 720 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 INIPQ9NRY2 104 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C19orf12Q9NSK7 152 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SACM1LQ9NTJ5 587 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CCM2LQ9NUG4 571 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.18□□□□□ -2.06
USP53-202ENST00000450251 ARHGAP28Q9P2N2 729 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms