RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 FAM98BQ52LJ0 330 aaKnown RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 TOR2AQ5JU69 321 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 SPANXN2Q5MJ10 180 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 PXDC1Q5TGL8 231 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 NXNL2Q5VZ03 156 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 JADE1Q6IE81 842 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 CUZD1Q86UP6 607 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 SLC22A15Q8IZD6 547 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 LRCH3Q96II8 777 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 AGAP2Q99490 1192 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 UQCC2Q9BRT2 126 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 C6orf62Q9GZU0 229 aaPredicted RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 POMKQ9H5K3 350 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 FAM49BQ9NUQ9 324 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 POLR3BQ9NW08 1133 aaPredicted RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 TRMT6Q9UJA5 497 aaKnown RBP18.96■□□□□ 0.63
HMGA1-205ENST00000447654 TLR6Q9Y2C9 796 aa18.96■□□□□ 0.63
HMGA1-205ENST00000447654 TRIM3O75382 744 aaPredicted RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 ANGPTL1O95841 491 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 ITGAMP11215 1152 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 TCF3P15923 654 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 CD36P16671 472 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 ARF4P18085 180 aaPredicted RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 POU6F2P78424 691 aaPredicted RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 KCNAB2Q13303 367 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 GRM3Q14832 879 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 UGP2Q16851 508 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 MARCH8Q5T0T0 291 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 KCNMB4Q86W47 210 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 KBTBD8Q8NFY9 601 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 PPTC7Q8NI37 304 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 SH3KBP1Q96B97 665 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 NSMCE2Q96MF7 247 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 TM9SF2Q99805 663 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 DNAJB9Q9UBS3 223 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 AKT3Q9Y243 479 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 AUP1Q9Y679 476 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 MEIOCA2RUB1 952 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 NPPAP01160 153 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 ACADMP11310 421 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 CAPN3P20807 821 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 MRPL19P49406 292 aaKnown RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 FCGRTP55899 365 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 GBE1Q04446 702 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 FAPQ12884 760 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 CA9Q16790 459 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 DDR2Q16832 855 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 PYCR3Q53H96 274 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 TXNDC5Q8NBS9 432 aaKnown RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 FLCNQ8NFG4 579 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 RPL3LQ92901 407 aaKnown RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 PTPN18Q99952 460 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 NFKBIZQ9BYH8 718 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 RPF1Q9H9Y2 349 aaKnown RBP18.95■□□□□ 0.62
HMGA1-205ENST00000447654 IL1RL2Q9HB29 575 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 ACOT13Q9NPJ3 140 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 AP3M1Q9Y2T2 418 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 LYVE1Q9Y5Y7 322 aa18.95■□□□□ 0.62
HMGA1-205ENST00000447654 PRLP01236 227 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 SMPD1P17405 629 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 SLC26A3P40879 764 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 GLRBP48167 497 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 DPYSL2Q16555 572 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 KIF19Q2TAC6 998 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 SLC10A6Q3KNW5 377 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 DPY19L3Q6ZPD9 716 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 AADATQ8N5Z0 425 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 ANKRD53Q8N9V6 530 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 OR10T2Q8NGX3 314 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 SEPHS2Q99611 448 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 SNRNP25Q9BV90 132 aaKnown RBP18.94■□□□□ 0.62
HMGA1-205ENST00000447654 ROGDIQ9GZN7 287 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 GLTPQ9NZD2 209 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 ERVK-18Q9QC07 812 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 KLHL21Q9UJP4 597 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 MAGED2Q9UNF1 606 aaPredicted RBP18.94■□□□□ 0.62
HMGA1-205ENST00000447654 ERVW-1Q9UQF0 538 aa18.94■□□□□ 0.62
HMGA1-205ENST00000447654 A0A087X1B8 175 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 LINC00862A6NCI5 91 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 STX7O15400 261 aaKnown RBP18.93■□□□□ 0.62
HMGA1-205ENST00000447654 NDUFA2O43678 99 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 TNNC2P02585 160 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 PDGFAP04085 211 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 ITGB3P05106 788 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 RBP1P09455 135 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 HOXB1P14653 301 aaPredicted RBP18.93■□□□□ 0.62
HMGA1-205ENST00000447654 CD19P15391 556 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 HOXB6P17509 224 aaKnown RBP18.93■□□□□ 0.62
HMGA1-205ENST00000447654 ETV1P50549 477 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 CHRNB3Q05901 458 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 BAMBIQ13145 260 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 BCL7AQ4VC05 210 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 CES3Q6UWW8 571 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 CCDC190Q86UF4 302 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 PAF1Q8N7H5 531 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 MAT2BQ9NZL9 334 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 OAS3Q9Y6K5 1087 aaKnown RBP18.93■□□□□ 0.62
HMGA1-205ENST00000447654 PCM1Q15154 2024 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 DOCK3Q8IZD9 2030 aa18.93■□□□□ 0.62
HMGA1-205ENST00000447654 ATP6AP2A0A1C7CYW4 349 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms