RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 AKAP7Q9P0M2 348 aaPredicted RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 UBQLN1Q9UMX0 589 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 PCDHGA7Q9Y5G6 932 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TTC34A8MYJ7 566 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 MDM4O15151 490 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 DFNA5O60443 496 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 SLC6A2P23975 617 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 LCN1P31025 176 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CDH12P55289 794 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 OR13F1Q8NGS4 319 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 HERPUD2Q9BSE4 406 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ARMC1Q9NVT9 282 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 OR12D3Q9UGF7 316 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 USP32Q8NFA0 1604 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TSPAN3O60637 253 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 APOFQ13790 326 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 VWDEQ8N2E2 1590 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 SEC14L4Q9UDX3 406 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 NCOR1O75376 2440 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 EIF2B5Q13144 721 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 ESCO2Q56NI9 601 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 NHSL2Q5HYW2 709 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 OR2T5Q6IEZ7 315 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ATP6V0D2Q8N8Y2 350 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 OR2T29Q8NH02 315 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 POF1BQ8WVV4 589 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 SNAPC3Q92966 411 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TXNDC15Q96J42 360 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 KCTD7Q96MP8 289 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 COMMD3Q9UBI1 195 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TIMM22Q9Y584 194 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 STOMP27105 288 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 RPL6Q02878 288 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 HIST2H2ACQ16777 129 aaPredicted RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 SH3PXD2AQ5TCZ1 1133 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 HIST2H2AA3Q6FI13 130 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 HS6ST3Q8IZP7 471 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CNIH3Q8TBE1 160 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 HTATIP2Q9BUP3 242 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ZNF490Q9ULM2 529 aaPredicted RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 INMT-MINDY4F8WBC2 141 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 FPGTO14772 594 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 NRLP54845 237 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 INHBEP58166 350 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ZNF177Q13360 481 aaPredicted RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 ZNF567Q8N184 647 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 SLC1A7O00341 560 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TRBC1P01850 177 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 PRKACGP22612 351 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CCR10P46092 362 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 MAZP56270 477 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 STX4Q12846 297 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 PTPRNQ16849 979 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 AFTPHQ6ULP2 937 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 SLC15A3Q8IY34 581 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 FAM105AQ9NUU6 356 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 MRPL42Q9Y6G3 142 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 ITGB5P18084 799 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 GCAP28676 217 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ACSL1P33121 698 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 KIAA1841Q6NSI8 718 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 DDX1Q92499 740 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 SMG7Q92540 1137 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 GBA3Q9H227 469 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 NUP50Q9UKX7 468 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 YDJCA8MPS7 323 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 PCSK6P29122 969 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 UGT2B15P54855 530 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 RPL38P63173 70 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 LILRA2Q8N149 483 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 FAM83DQ9H4H8 585 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 COQ3Q9NZJ6 369 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 MAU2Q9Y6X3 613 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 B8ZZF3 427 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 OR10H3O60404 316 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 MXD1Q05195 221 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 LRP10Q7Z4F1 713 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 OR4A15Q8NGL6 344 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 C9orf43Q8TAL5 461 aaPredicted RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 MED11Q9P086 117 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ST3GAL5Q9UNP4 418 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CASP3P42574 277 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 GALEQ14376 348 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CXXC5Q7LFL8 322 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 CHERPQ8IWX8 916 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 CADM3Q8N126 398 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ASB15Q8WXK1 588 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TMEM39BQ9GZU3 492 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 PPIL3Q9H2H8 161 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 KLK14Q9P0G3 267 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CES1P23141 567 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 RPS3AP61247 264 aaKnown RBP7.78□□□□□ -1.16
SMG1-202ENST00000446231 UGCGQ16739 394 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 ANKRD46Q86W74 232 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 B3GALNT1O75752 331 aa7.77□□□□□ -1.16
SMG1-202ENST00000446231 UFM1P61960 85 aa7.77□□□□□ -1.16
SMG1-202ENST00000446231 STEAP4Q687X5 459 aa7.77□□□□□ -1.16
SMG1-202ENST00000446231 TTLL2Q9BWV7 592 aa7.77□□□□□ -1.16
SMG1-202ENST00000446231 PSAT1Q9Y617 370 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms