RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GALNT5Q7Z7M9 940 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ZC3H7AQ8IWR0 971 aaKnown RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 TP53INP2Q8IXH6 220 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 Q96MT0 163 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MTIF3Q9H2K0 278 aaKnown RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 TTC24A2A3L6 582 aaPredicted RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ANKDD1BA6NHY2 528 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 SLC38A8A6NNN8 435 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 RPS14P62263 151 aaKnown RBP16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ABRQ12979 859 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 KRT78Q8N1N4 520 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MCFD2Q8NI22 146 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MAPK15Q8TD08 544 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 ABCG8Q9H221 673 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 CLCA2Q9UQC9 943 aa16.43■□□□□ 0.22
TCOF1-206ENST00000445265 STX16O14662 325 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 NPPAP01160 153 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 FABP3P05413 133 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 SLC6A2P23975 617 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 OLR1P78380 273 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 RASAL3Q86YV0 1011 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 UMODL1-AS1Q8N2C9 162 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 POC5Q8NA72 575 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 PGAP3Q96FM1 320 aaPredicted RBP16.42■□□□□ 0.22
TCOF1-206ENST00000445265 ADAM30Q9UKF2 790 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 TNRC6CQ9HCJ0 1690 aaKnown RBP16.42■□□□□ 0.22
TCOF1-206ENST00000445265 ILVBLA1L0T0 632 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 K7EPI3 171 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 ITPKAP23677 461 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 ACVRL1P37023 503 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 SPIBQ01892 262 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 TGM3Q08188 693 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 CCL14Q16627 93 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 PPP1R3AQ16821 1122 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 PDZK1Q5T2W1 519 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 SMG8Q8ND04 991 aaKnown RBP16.42■□□□□ 0.22
TCOF1-206ENST00000445265 OR5K1Q8NHB7 308 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 SLC45A3Q96JT2 553 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 ZNF696Q9H7X3 374 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 CNOT11Q9UKZ1 510 aaKnown RBP16.42■□□□□ 0.22
TCOF1-206ENST00000445265 EMCNQ9ULC0 261 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 BTBD3Q9Y2F9 522 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 CLDN25C9JDP6 229 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 CDC7O00311 574 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 FPGTO14772 594 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 MAFKO60675 156 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 GLDCP23378 1020 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 RPS24P62847 133 aaKnown RBP16.42■□□□□ 0.22
TCOF1-206ENST00000445265 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 EGFLAMQ63HQ2 1017 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 GPRIN1Q7Z2K8 1008 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 C19orf18Q8NEA5 215 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 MZB1Q8WU39 189 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 A0A1W2PQ67 120 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 RBM48Q5RL73 367 aaKnown RBP16.42■□□□□ 0.22
TCOF1-206ENST00000445265 TRNP1Q6NT89 227 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 HACD2Q6Y1H2 254 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 CHSY3Q70JA7 882 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 RANBP9Q96S59 729 aa16.42■□□□□ 0.22
TCOF1-206ENST00000445265 ERN1O75460 977 aaKnown RBP16.41■□□□□ 0.22
TCOF1-206ENST00000445265 CXCR2P25025 360 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 SMIM11AP58511 58 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 MPPE1Q53F39 396 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 C14orf80Q86SX3 495 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 ZDHHC21Q8IVQ6 265 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 RHEBL1Q8TAI7 183 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 IFNGR2P38484 337 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 SFSWAPQ12872 951 aaKnown RBP16.41■□□□□ 0.22
TCOF1-206ENST00000445265 MOCOSQ96EN8 888 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 HIPK3Q9H422 1215 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 ZDHHC7Q9NXF8 308 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 TDRKHQ9Y2W6 561 aaKnown RBP16.41■□□□□ 0.22
TCOF1-206ENST00000445265 SELPP16109 830 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 VARSP26640 1264 aaKnown RBP16.41■□□□□ 0.22
TCOF1-206ENST00000445265 ITGA1P56199 1179 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 OSGEPL1Q9H4B0 414 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 ERGIC3Q9Y282 383 aa16.41■□□□□ 0.22
TCOF1-206ENST00000445265 PRAMEF11O60813 436 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 CNTN5O94779 1100 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 OR6B1O95007 311 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 FADS2O95864 444 aaKnown RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 NSG1P42857 185 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 SLC16A1P53985 500 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 P2RY8Q86VZ1 359 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 KDM1BQ8NB78 822 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 KCNN1Q92952 543 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 CCM2LQ9NUG4 571 aaPredicted RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 DGKBQ9Y6T7 804 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 ZBTB42B2RXF5 422 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 PRKCGP05129 697 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 UFM1P61960 85 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 DPY19L1Q2PZI1 675 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 PM20D1Q6GTS8 502 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
TCOF1-206ENST00000445265 FBXL19Q6PCT2 694 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 PAGE2Q7Z2X7 111 aa16.4■□□□□ 0.22
TCOF1-206ENST00000445265 BBS4Q96RK4 519 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms