RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 OR2L2Q8NH16 312 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 HM13Q8TCT9 377 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 CPNE1Q99829 537 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 RTKNQ9BST9 563 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 CORO1CQ9ULV4 474 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 DNAJC16Q9Y2G8 782 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
COL7A1-202ENST00000422991 ASCC3Q8N3C0 2202 aaKnown RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 ARID1BQ8NFD5 2236 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-202ENST00000422991 ARHGEF17Q96PE2 2063 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 COL5A1P20908 1838 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 C17orf113A0A1B0GUU1 675 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 NEMP2A6NFY4 417 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 C4orf47A7E2U8 309 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 IQCF5A8MTL0 148 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 YY2O15391 372 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 NIPSNAP2O75323 286 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 ANXA6P08133 673 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 GIMD1P0DJR0 217 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 CSE1LP55060 971 aaKnown RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 SLC14A1Q13336 389 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 NFE2L1Q14494 772 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 UAP1Q16222 522 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 DEFB133Q30KQ1 61 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 STPG1Q5TH74 334 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 LVRNQ6Q4G3 990 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 FAM83HQ6ZRV2 1179 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 ZC3HC1Q86WB0 502 aaKnown RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 KRT222Q8N1A0 295 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 MYRIPQ8NFW9 859 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 UHMK1Q8TAS1 419 aaKnown RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 AARSD1Q9BTE6 412 aaKnown RBP16.69■□□□□ 0.26
COL7A1-202ENST00000422991 TSSK1BQ9BXA7 367 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 CCDC68Q9H2F9 335 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 OSGEPL1Q9H4B0 414 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 NLGN3Q9NZ94 848 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 TAAR2Q9P1P5 351 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 COMMD10Q9Y6G5 202 aa16.69■□□□□ 0.26
COL7A1-202ENST00000422991 TPP1O14773 563 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 SLC30A4O14863 429 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 FFAR2O15552 330 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 TRIM16O95361 564 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 CD59P13987 128 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 ITGB6P18564 788 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 GP5P40197 560 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 LIMK1P53667 647 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 ILF2Q12905 390 aaKnown RBP16.68■□□□□ 0.26
COL7A1-202ENST00000422991 SLC29A2Q14542 456 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 SUZ12Q15022 739 aaKnown RBP16.68■□□□□ 0.26
COL7A1-202ENST00000422991 KLHL38Q2WGJ6 581 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 MAP9Q49MG5 647 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 RBM20Q5T481 1227 aaKnown RBP16.68■□□□□ 0.26
COL7A1-202ENST00000422991 DBX2Q6ZNG2 339 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 LILRA3Q8N6C8 439 aaPredicted RBP16.68■□□□□ 0.26
COL7A1-202ENST00000422991 OR4C6Q8NH72 309 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 KCNJ9Q92806 393 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 NDNQ99608 321 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 RBBP8Q99708 897 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 COG4Q9H9E3 785 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 SPATS2LQ9NUQ6 558 aaKnown RBP16.68■□□□□ 0.26
COL7A1-202ENST00000422991 TXNDC16Q9P2K2 825 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 FAM8A1Q9UBU6 413 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 TBC1D29Q9UFV1 150 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 DOLKQ9UPQ8 538 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 MED16Q9Y2X0 877 aa16.68■□□□□ 0.26
COL7A1-202ENST00000422991 A6NCN8 305 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 FLRT2O43155 660 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 ALPPL2P10696 532 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 CCR7P32248 378 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 HSD17B3P37058 310 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 BOP1Q14137 746 aaKnown RBP16.67■□□□□ 0.26
COL7A1-202ENST00000422991 INAVAQ3KP66 663 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 UAP1L1Q3KQV9 507 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 METRNLQ641Q3 311 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 MREGQ8N565 214 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 FAM46DQ8NEK8 389 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 UBLCP1Q8WVY7 318 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-202ENST00000422991 ELMO1Q92556 727 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 ATXN7L3BQ96GX2 97 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 VPS39Q96JC1 886 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 BTBD3Q9Y2F9 522 aa16.67■□□□□ 0.26
COL7A1-202ENST00000422991 SLC5A10A0PJK1 596 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 E5RI56 91 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 TRIM38O00635 465 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 LIN7AO14910 233 aaPredicted RBP16.66■□□□□ 0.26
COL7A1-202ENST00000422991 SNX2O60749 519 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 FAM155BO75949 473 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 EML2O95834 649 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 IDSP22304 550 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 AOAHP28039 575 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 GRK6P43250 576 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 CLCN7P51798 805 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 LIMK2P53671 638 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 CDKN2DP55273 166 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 TIAL1Q01085 375 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL7A1-202ENST00000422991 RPA4Q13156 261 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 BRD3Q15059 726 aa16.66■□□□□ 0.26
COL7A1-202ENST00000422991 SYTL3Q4VX76 610 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms