RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 GNPTGQ9UJJ9 305 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 AGO1Q9UL18 857 aaKnown RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 KCNE2Q9Y6J6 123 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 OAS3Q9Y6K5 1087 aaKnown RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 MYO7AQ13402 2215 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 UBE2QL1A1L167 161 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 RLN1P04808 185 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 GSK3BP49841 420 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 MEP1AQ16819 746 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 HOMEZQ8IX15 550 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 RNASE11Q8TAA1 199 aaKnown RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ITCHQ96J02 903 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 COPS8Q99627 209 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 CCNB1IP1Q9NPC3 277 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 PSME2Q9UL46 239 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 FAM25EA8MYX2 175 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 COL6A2P12110 1019 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 TUFMP49411 452 aaKnown RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 COPZ1P61923 177 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 PCDH1Q08174 1060 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 XAGE5Q8WWM1 108 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 IPPKQ9H8X2 491 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 PNPLA8Q9NP80 782 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 COMMD9Q9P000 198 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ZNF490Q9ULM2 529 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-202ENST00000415950 VPS4AQ9UN37 437 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 ARL5AQ9Y689 179 aa12.75□□□□□ -0.37
SCN1B-202ENST00000415950 SGTAO43765 313 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 GOT2P00505 430 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 MYCLP1P12525 358 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 GNPDA1P46926 289 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 R3HCC1LQ7Z5L2 792 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 OR7D4Q8NG98 312 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 RAD51AP1Q96B01 352 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 LRRC58Q96CX6 371 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 ELL3Q9HB65 397 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 ING3Q9NXR8 418 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 A0A1W2PQH9 124 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 HOXA2O43364 376 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 ITGA2P17301 1181 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 PUDPQ08623 228 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 HECTD3Q5T447 861 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 OLFML2AQ68BL7 652 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SLC2A7Q6PXP3 512 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 MUS81Q96NY9 551 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 MCMBPQ9BTE3 642 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SPG21Q9NZD8 308 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 MALT1Q9UDY8 824 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 AXIN1O15169 862 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 TBL1XO60907 577 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 ARSAP15289 507 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 KIR3DL1P43629 444 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 CDKL1Q00532 357 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 C5orf22Q49AR2 442 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 TMEM110Q86TL2 294 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 CENPSQ8N2Z9 138 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 ZNF433Q8N7K0 673 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SLC45A3Q96JT2 553 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 AARSD1Q9BTE6 412 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 EQTNQ9NQ60 294 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 TRPV5Q9NQA5 729 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 A0A0J9YVX5 310 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 CPSF4LA6NMK7 179 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SLC28A1O00337 649 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SLC28A2O43868 658 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 C9P02748 559 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 STARP49675 285 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 TCEAL1Q15170 157 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 P2RY8Q86VZ1 359 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 IPCEF1Q8WWN9 437 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 TNKS2Q9H2K2 1166 aa12.74□□□□□ -0.37
SCN1B-202ENST00000415950 ADARB2Q9NS39 739 aaKnown RBP12.74□□□□□ -0.37
SCN1B-202ENST00000415950 XPNPEP2O43895 674 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 NDUFS2O75306 463 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 TRBC1P01850 177 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 PKMP14618 531 aaKnown RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ITGA3P26006 1051 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 NUDT6P53370 316 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 IST1P53990 364 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 DAOAP59103 153 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 UFM1P61960 85 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms