RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ARFGAP3Q9NP61 516 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 LHX9Q9NQ69 397 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 KLC4Q9NSK0 619 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 HACD3Q9P035 362 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ATXN10Q9UBB4 475 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 AAR2Q9Y312 384 aaKnown RBP12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF711Q9Y462 761 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
CTHRC1-202ENST00000415886 LOC285095A0A1B0GVY8 99 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 GRID2IPA4D2P6 1211 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 GOLGA6L3A6NEY3 463 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 TOX3O15405 576 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 KCNN4O15554 427 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 KRT86O43790 486 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 VIPP01282 170 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 CCNYL3P0C7X3 344 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 RBP3P10745 1247 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 FGF5P12034 268 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF8P17098 575 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 XRCC1P18887 633 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 PTPN7P35236 360 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC19A1P41440 591 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 GEMP55040 296 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 RPS18P62269 152 aaKnown RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 CHAF1BQ13112 559 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 NOMO1Q15155 1222 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 SEPT7Q16181 437 aaKnown RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 PRR30Q53SZ7 412 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 ZDHHC20Q5W0Z9 365 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 TRIM48Q8IWZ4 208 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 TRAM1L1Q8N609 369 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 GDAP1Q8TB36 358 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 CARD9Q9H257 536 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 C10orf88Q9H8K7 445 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 TRIM39Q9HCM9 518 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 BPIFA1Q9NP55 256 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF624Q9P2J8 865 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 PADI1Q9ULC6 663 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 MAP4K5Q9Y4K4 846 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-202ENST00000415886 ENO4A6NNW6 628 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 RECKO95980 971 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 HLA-DPA1P20036 260 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 COL8A1P27658 744 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 CAPZBP47756 277 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 CLCNKAP51800 687 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 PGDP52209 483 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 CACHD1Q5VU97 1274 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 ZNF787Q6DD87 383 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 CRTC3Q6UUV7 619 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 FAM92BQ6ZTR7 304 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 PRSS42Q7Z5A4 293 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 PPP1R3BQ86XI6 285 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 LRRC57Q8N9N7 239 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 GPR26Q8NDV2 337 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 BLOC1S5Q8TDH9 187 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC25A23Q9BV35 468 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 OR2AG1Q9H205 316 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 AKIRIN1Q9H9L7 192 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 CASS4Q9NQ75 786 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 CUEDC1Q9NWM3 386 aaPredicted RBP12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 TRIM10Q9UDY6 481 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC23A2Q9UGH3 650 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 GUCA1BQ9UMX6 200 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 PKP3Q9Y446 797 aa12.97□□□□□ -0.33
CTHRC1-202ENST00000415886 C2orf81A6NN90 581 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 C21orf140B9A014 251 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 FTCDO95954 541 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 MT-ND3P03897 115 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 HMGCLP35914 325 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 DCDC1P59894 354 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 PPP1CAP62136 330 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 MRPL49Q13405 166 aaKnown RBP12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 GTF2H3Q13889 308 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 SLC1A5Q15758 541 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 INSCQ1MX18 579 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 ANKRD20A2Q5SQ80 823 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 ANKRD20A1Q5TYW2 823 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 ANKRD20A3Q5VUR7 823 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 PDPK2PQ6A1A2 396 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 IRGCQ6NXR0 463 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 AADACL2Q6P093 401 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 FAM199XQ6PEV8 388 aaPredicted RBP12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 KDELC1Q6UW63 502 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 GLT6D1Q7Z4J2 308 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 TMEM139Q8IV31 216 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 KLHL6Q8WZ60 621 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 ALG3Q92685 438 aa12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 OXNAD1Q96HP4 312 aaPredicted RBP12.96□□□□□ -0.33
CTHRC1-202ENST00000415886 FAM118BQ9BPY3 351 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms