RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 RAP1GDS1P52306 607 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 SH3BGRP55822 239 aaPredicted RBP14.33□□□□□ -0.11
SGCE-202ENST00000415788 PTK2BQ14289 1009 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 FASTKD1Q53R41 847 aaKnown RBP14.33□□□□□ -0.11
SGCE-202ENST00000415788 ZRANB3Q5FWF4 1079 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 LYPLAL1Q5VWZ2 237 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 MRNIPQ6NTE8 343 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 Q6ZSR6 202 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 PELI3Q8N2H9 469 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 RNF217Q8TC41 542 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 TRIM56Q9BRZ2 755 aaKnown RBP14.33□□□□□ -0.11
SGCE-202ENST00000415788 DHRS4Q9BTZ2 278 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 TSSK1BQ9BXA7 367 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 CATSPERZQ9NTU4 200 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 ARL8BQ9NVJ2 186 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 CA5BQ9Y2D0 317 aa14.33□□□□□ -0.11
SGCE-202ENST00000415788 TRBV5-4A0A0C4DH59 114 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 A0A1W2PPM1 405 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 SLC25A14O95258 325 aaPredicted RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 THEGLP0DJG4 465 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 THOP1P52888 689 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 THOC5Q13769 683 aaKnown RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 NFATC4Q14934 902 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 LPAL2Q16609 132 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 DUOXA1Q1HG43 343 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 LDLRAP1Q5SW96 308 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 CYS1Q717R9 158 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 SUMF1Q8NBK3 374 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 DDHD1Q8NEL9 900 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 OR13H1Q8NG92 308 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 GPR150Q8NGU9 434 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 HEXDCQ8WVB3 486 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 NRG4Q8WWG1 115 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 FUBP1Q96AE4 644 aaKnown RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 CERS2Q96G23 380 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 COX14Q96I36 57 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 ZNF184Q99676 751 aaPredicted RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 ZCCHC2Q9C0B9 1178 aaKnown RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 TMEM74BQ9NUR3 256 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 RABGEF1Q9UJ41 708 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
SGCE-202ENST00000415788 OR1A2Q9Y585 309 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 SLCO1B1Q9Y6L6 691 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 FANCMQ8IYD8 2048 aa14.33□□□□□ -0.12
SGCE-202ENST00000415788 ABCA7Q8IZY2 2146 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 OR51F1A6NGY5 319 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 PFDN6O15212 129 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 INPP4BO15327 924 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A9O60656 530 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 KRT36O76013 467 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 RETP07949 1114 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 ESRRAP11474 423 aaPredicted RBP14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A6P19224 532 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A1P22309 533 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A4P22310 534 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A3P35503 534 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A5P35504 534 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 C21orf59P57076 290 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 SESN3P58005 492 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 CUL3Q13618 768 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 NEPROQ6NW34 567 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 C3orf62Q6ZUJ4 267 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 SDCCAG8Q86SQ7 713 aaPredicted RBP14.32□□□□□ -0.12
SGCE-202ENST00000415788 KCNMB4Q86W47 210 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 NXPE1Q8N323 547 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 BANPQ8N9N5 519 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 RFWD2Q8NHY2 731 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 GBP5Q96PP8 586 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A7Q9HAW7 530 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A10Q9HAW8 530 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 UGT1A8Q9HAW9 530 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 PLAC1Q9HBJ0 212 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 IL1RAPL1Q9NZN1 696 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 GMEB2Q9UKD1 530 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 PLXNA2O75051 1894 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 THADAQ6YHU6 1953 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 SCN8AQ9UQD0 1980 aa14.32□□□□□ -0.12
SGCE-202ENST00000415788 GPR89AB7ZAQ6 455 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 TLR4O00206 839 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 CD3EAPO15446 510 aaKnown RBP14.31□□□□□ -0.12
SGCE-202ENST00000415788 WNT1P04628 370 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 GPR89BP0CG08 455 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 RALBP11234 206 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 OGNP20774 298 aaKnown RBP14.31□□□□□ -0.12
SGCE-202ENST00000415788 MPLP40238 635 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 TTPAP49638 278 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 PDE1CQ14123 709 aaPredicted RBP14.31□□□□□ -0.12
SGCE-202ENST00000415788 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 C6orf163Q5TEZ5 329 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 RNF220Q5VTB9 566 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 MACC1Q6ZN28 852 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 TAS2R42Q7RTR8 314 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 TCP10LQ8TDR4 215 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 TCF12Q99081 682 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 ACSS3Q9H6R3 686 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 TRIM39Q9HCM9 518 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 MOCS1Q9NZB8 636 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 DCTN4Q9UJW0 460 aa14.31□□□□□ -0.12
SGCE-202ENST00000415788 VPS9D1Q9Y2B5 631 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms