RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SLC13A1Q9BZW2 595 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 DERL2Q9GZP9 239 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 FGF22Q9HCT0 170 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 AASDHPPTQ9NRN7 309 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 IGSF5Q9NSI5 407 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 GRID1Q9ULK0 1009 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 PLLPQ9Y342 182 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 PCYT1BQ9Y5K3 369 aaPredicted RBP14.01□□□□□ -0.17
SF3B1-204ENST00000414963 DGKBQ9Y6T7 804 aa14.01□□□□□ -0.17
SF3B1-204ENST00000414963 FAM86C2PA6NEL3 165 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 PRR19A6NJB7 356 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 TLR4O00206 839 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 LIN7AO14910 233 aaPredicted RBP14□□□□□ -0.17
SF3B1-204ENST00000414963 VILLO15195 856 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 GLRA3O75311 464 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 WNT1P04628 370 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 APOA4P06727 396 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 LTA4HP09960 611 aaKnown RBP14□□□□□ -0.17
SF3B1-204ENST00000414963 THEGLP0DJG4 465 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 ITGB6P18564 788 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 MAOBP27338 520 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 RGS4P49798 205 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 ATP6V0D1P61421 351 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 IRF9Q00978 393 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 DLG1Q12959 904 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 RPA4Q13156 261 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 SRSF5Q13243 272 aaKnown RBP14□□□□□ -0.17
SF3B1-204ENST00000414963 MPP2Q14168 576 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 FZD2Q14332 565 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 FAM83EQ2M2I3 478 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 TSNAXIP1Q2TAA8 658 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 AGAP9Q5VTM2 703 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 LYSMD4Q5XG99 296 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 LRRC8EQ6NSJ5 796 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 ENPP7Q6UWV6 458 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 XKR5Q6UX68 686 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 CYHR1Q6ZMK1 362 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 CDHR3Q6ZTQ4 885 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 NEK10Q6ZWH5 1172 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 AMZ2Q86W34 360 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 GALNT13Q8IUC8 556 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 HM13Q8TCT9 377 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 DENND1AQ8TEH3 1009 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 KCTD4Q8WVF5 259 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 ELMO1Q92556 727 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 FAM136AQ96C01 138 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 NMRAL1Q9HBL8 299 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 SARS2Q9NP81 518 aaKnown RBP14□□□□□ -0.17
SF3B1-204ENST00000414963 ZNHIT2Q9UHR6 403 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 SUFUQ9UMX1 484 aa14□□□□□ -0.17
SF3B1-204ENST00000414963 RUVBL2Q9Y230 463 aaKnown RBP14□□□□□ -0.17
SF3B1-204ENST00000414963 TMEM120BA0PK00 339 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 PRR5-ARHGAP8B1AHC4 643 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 TM9SF1O15321 606 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 BCAT2O15382 392 aaPredicted RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 SPAG7O75391 227 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 ZWINTO95229 277 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 MPC1LP0DKB6 136 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 NR1D1P20393 614 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 ITPKAP23677 461 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 RPA3P35244 121 aaPredicted RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 GMPRP36959 345 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 CLCNKAP51800 687 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 AFF3P51826 1226 aaKnown RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 SRP54P61011 504 aaKnown RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 PPP2R2AP63151 447 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 LRP8Q14114 963 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 ACAP2Q15057 778 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 ALG11Q2TAA5 492 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 ACSBG2Q5FVE4 666 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 METRNLQ641Q3 311 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 CRTC3Q6UUV7 619 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 MTERF4Q7Z6M4 381 aaKnown RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 RASGRP3Q8IV61 690 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 CPNE9Q8IYJ1 553 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 EEF1AKMT1Q8WVE0 214 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 GLMNQ92990 594 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 NXNL1Q96CM4 212 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 TSNARE1Q96NA8 513 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 MIR1-1HGQ9H1L0 117 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 TFB2MQ9H5Q4 396 aaKnown RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 TRNAU1APQ9NX07 287 aaKnown RBP13.99□□□□□ -0.17
SF3B1-204ENST00000414963 KLQ9UEF7 1012 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 SLC23A2Q9UGH3 650 aa13.99□□□□□ -0.17
SF3B1-204ENST00000414963 RBP1P09455 135 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 CD1DP15813 335 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 VCLP18206 1134 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 OAS2P29728 719 aaKnown RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 HPDP32754 393 aaPredicted RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 HOXD12P35452 270 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 DPP6P42658 865 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 DHPSP49366 369 aaPredicted RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 KPNA2P52292 529 aaKnown RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 NXPH1P58417 271 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 EIF2B5Q13144 721 aaKnown RBP13.98□□□□□ -0.17
SF3B1-204ENST00000414963 CSHL1Q14406 222 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 CCDC153Q494R4 210 aa13.98□□□□□ -0.17
SF3B1-204ENST00000414963 PEAR1Q5VY43 1037 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms