RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZNF195O14628 629 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 MAGEC1O60732 1142 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 RPP40O75818 363 aaKnown RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 PAK4O96013 591 aaPredicted RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 SLC4A1P02730 911 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 RPSAP08865 295 aaKnown RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 PGM1P36871 562 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 RAP1GDS1P52306 607 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 KPNB1Q14974 876 aaKnown RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 ANGPT1Q15389 498 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 KHDC1Q4VXA5 237 aaKnown RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 ACSBG2Q5FVE4 666 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 HENMT1Q5T8I9 393 aaKnown RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 ZDHHC20Q5W0Z9 365 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 KIAA0895LQ68EN5 471 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 KIAA0930Q6ICG6 404 aaPredicted RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 ZNF765Q7L2R6 523 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 FBXO27Q8NI29 283 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 ZDHHC16Q969W1 377 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 BIRC7Q96CA5 298 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 ZNF570Q96NI8 536 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 NMRAL1Q9HBL8 299 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 RAD18Q9NS91 495 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 PNPOQ9NVS9 261 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 CD84Q9UIB8 345 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 FKBPLQ9UIM3 349 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 APOBEC2Q9Y235 224 aaKnown RBP9.83□□□□□ -0.84
DDB1-202ENST00000414411 MYO15AQ9UKN7 3530 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 THADAQ6YHU6 1953 aa9.83□□□□□ -0.84
DDB1-202ENST00000414411 CCDC162PA2VCL2 907 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 METTL12A8MUP2 240 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 TMEM114B3SHH9 223 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 H2AFYO75367 372 aaKnown RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 VAPBO95292 243 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 SOD1P00441 154 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 APOA4P06727 396 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 SP9P0CG40 484 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 BCKDHBP21953 392 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 IDH3AP50213 366 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 SGCGQ13326 291 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 WSCD2Q2TBF2 565 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 DNAL1Q4LDG9 190 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 NAPRTQ6XQN6 538 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 SLC36A4Q6YBV0 504 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 LCA5Q86VQ0 697 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.82□□□□□ -0.84
DDB1-202ENST00000414411 PELI3Q8N2H9 469 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 TP53I13Q8NBR0 393 aaPredicted RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 ZBTB44Q8NCP5 570 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 WDR60Q8WVS4 1066 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 N4BP2L2Q92802 583 aaPredicted RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 LENG8Q96PV6 779 aaPredicted RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 ORAI3Q9BRQ5 295 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 RIOK2Q9BVS4 552 aaKnown RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 C1QTNF1Q9BXJ1 281 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 DUSP15Q9H1R2 295 aaPredicted RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 C1orf21Q9H246 121 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 MID2Q9UJV3 735 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 APPL1Q9UKG1 709 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 SLC39A10Q9ULF5 831 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 ANKRD6Q9Y2G4 727 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 FANCMQ8IYD8 2048 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 GLYATL1P3A0A0U1RQE8 302 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 K7ESM1 405 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 RAD51BO15315 384 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 HRO43593 1189 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 KLHL2O95198 593 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 HSPA4LO95757 839 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 GABRB3P28472 473 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 MAT2AP31153 395 aaKnown RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 SPAM1P38567 509 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 RAPH1Q70E73 1250 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 TRAM1L1Q8N609 369 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 OR4L1Q8NH43 312 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 RDH11Q8TC12 318 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 GAB3Q8WWW8 586 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 KLK6Q92876 244 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 AP2M1Q96CW1 435 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 NUS1Q96E22 293 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 MBNL1Q9NR56 388 aaKnown RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 CUEDC1Q9NWM3 386 aaPredicted RBP9.82□□□□□ -0.84
DDB1-202ENST00000414411 ZSCAN32Q9NX65 697 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 TLK1Q9UKI8 766 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 TMPRSS11EQ9UL52 423 aa9.82□□□□□ -0.84
DDB1-202ENST00000414411 PLXNB3Q9ULL4 1909 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 TRBV5-4A0A0C4DH59 114 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 OR51F1A6NGY5 319 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 TK2O00142 265 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 SLC31A1O15431 190 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 PHGDHO43175 533 aaKnown RBP9.81□□□□□ -0.84
DDB1-202ENST00000414411 TRIM13O60858 407 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 NDUFS2O75306 463 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 SRP72O76094 671 aaKnown RBP9.81□□□□□ -0.84
DDB1-202ENST00000414411 GOT2P00505 430 aaKnown RBP9.81□□□□□ -0.84
DDB1-202ENST00000414411 AHSGP02765 367 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 SLC35E2BP0CK96 405 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 PAMP19021 973 aa9.81□□□□□ -0.84
DDB1-202ENST00000414411 TEAD1P28347 426 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms