RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 CHN1P15882 459 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CREB1P16220 341 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HOXB4P17483 251 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 UGT1A3P35503 534 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 WNT3AP56704 352 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CRADDP78560 199 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC18A2Q05940 514 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MGAT5Q09328 741 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MSLNQ13421 630 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 OLIG2Q13516 323 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MPP2Q14168 576 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZXDCQ2QGD7 858 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ANKRD20A4Q4UJ75 823 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PRRT3Q5FWE3 981 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FSCBQ5H9T9 825 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PITRM1Q5JRX3 1037 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PCID2Q5JVF3 399 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TPRG1LQ5T0D9 272 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CERCAMQ5T4B2 595 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ATP1A1-AS1Q5TC04 95 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LGSNQ5TDP6 509 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ESRP1Q6NXG1 681 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CASC4Q6P4E1 433 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TIFABQ6ZNK6 161 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PARGQ86W56 976 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 DCP2Q8IU60 420 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MFN1Q8IWA4 741 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CACNA2D3Q8IZS8 1091 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 BBS5Q8N3I7 341 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PGBD5Q8N414 524 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 Q8N9G6 341 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 DNAAF3Q8N9W5 541 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KDM1BQ8NB78 822 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 OR7D4Q8NG98 312 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FIBINQ8TAL6 211 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GPBAR1Q8TDU6 330 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 DENND1AQ8TEH3 1009 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PMEPA1Q969W9 287 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ALG14Q96F25 216 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SGSM3Q96HU1 749 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC45A3Q96JT2 553 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SMC6Q96SB8 1091 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MGME1Q9BQP7 344 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 POLR1EQ9GZS1 481 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TRABDQ9H4I3 376 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NT5MQ9NPB1 228 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 INTS9Q9NV88 658 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MKS1Q9NXB0 559 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SAMD15Q9P1V8 674 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KCND3Q9UK17 655 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZFR2Q9UPR6 939 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MAP4K5Q9Y4K4 846 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 IKBKGQ9Y6K9 419 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RNF215Q9Y6U7 377 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NIPBLQ6KC79 2804 aaeCLIP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 A0A1W2PPM1 405 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TYW5A2RUC4 315 aaKnown RBP9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SPINT1O43278 529 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SNRPAP09012 282 aaKnown RBP9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KRT15P19012 456 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ITGB7P26010 798 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CCNFP41002 786 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PLK1P53350 603 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ECT2LQ008S8 904 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 EIF2B5Q13144 721 aaKnown RBP9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 IHHQ14623 411 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 C16orf72Q14CZ0 275 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TCEA2Q15560 299 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RALGPS1Q5JS13 557 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PHF19Q5T6S3 580 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RNF219Q5W0B1 726 aaPredicted RBP9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SEL1L3Q68CR1 1132 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TCTN3Q6NUS6 607 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 C16orf46Q6P387 395 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HORMAD1Q86X24 394 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CARNMT1Q8N4J0 409 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PPM1NQ8N819 430 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KYQ8NBH2 561 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 IPMKQ8NFU5 416 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CDKL2Q92772 493 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PEX13Q92968 403 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TMEM159Q96B96 161 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CERS2Q96G23 380 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FEM1CQ96JP0 617 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SELENOSQ9BQE4 189 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MCMBPQ9BTE3 642 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FICDQ9BVA6 458 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CLPBQ9H078 707 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CDH19Q9H159 772 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GPR27Q9NS67 375 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 UBP1Q9NZI7 540 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SPASTQ9UBP0 616 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 UBA2Q9UBT2 640 aaPredicted RBP9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RPS6KL1Q9Y6S9 549 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ABCA2Q9BZC7 2435 aa9.43□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HIVEP3Q5T1R4 2406 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SVILO95425 2214 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms