RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CCL22O00626 93 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 GABRDO14764 452 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 GRID2O43424 1007 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TLX3O43711 291 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LILRB3O75022 631 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SIN3BO75182 1162 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RECQL5O94762 991 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RAPSNQ13702 412 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CHRNA6Q15825 494 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CST6Q15828 149 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ANKRD54Q6NXT1 300 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 MICU2Q8IYU8 434 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SLC39A11Q8N1S5 342 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF276Q8N554 614 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 MARK4Q96L34 752 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 APOLD1Q96LR9 279 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CNBD2Q96M20 576 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 RTP3Q9BQQ7 232 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SDCBP2Q9H190 292 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 NOL11Q9H8H0 719 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 IPPKQ9H8X2 491 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ELL3Q9HB65 397 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SNX7Q9UNH6 387 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 HCRTO43612 131 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 HLA-DQB2P05538 268 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 IDO1P14902 403 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 BDKRB1P46663 353 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 HSPA7P48741 367 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PLA2G16P53816 162 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 BTN3A2P78410 334 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PRAMEF14Q5SWL7 426 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PRAMEF13Q5VWM6 474 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 NEK10Q6ZWH5 1172 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 LYSMD3Q7Z3D4 306 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PIWIL4Q7Z3Z4 852 aaKnown RBP4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SNX32Q86XE0 403 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 DEFB107AQ8IZN7 70 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 FUKQ8N0W3 1084 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 KIF2BQ8N4N8 673 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 COX18Q8N8Q8 333 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF527Q8NB42 609 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 OR4K17Q8NGC6 315 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 TEX47Q8TBZ9 253 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 HDAC7Q8WUI4 952 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 PDLIM7Q9NR12 457 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 CALML5Q9NZT1 146 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 ADGRE2Q9UHX3 823 aa4.95□□□□□ -1.62
SCN3A-203ENST00000409101 SAC3D1A6NKF1 404 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 TTC34A8MYJ7 566 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 PEX1O43933 1283 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 DEAF1O75398 565 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FBLP22087 321 aaKnown RBP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 ITGA3P26006 1051 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 RPL10P27635 214 aaKnown RBP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CDKN2BP42772 138 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 GABRB2P47870 512 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 KHKP50053 298 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 NAGLUP54802 743 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 PER3P56645 1201 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CDC42P60953 191 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 MPP1Q00013 466 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 SPIBQ01892 262 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 TMED1Q13445 227 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 HKDC1Q2TB90 917 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 SAMD4BQ5PRF9 694 aaKnown RBP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 GCNT6Q5T4J0 391 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 WDR93Q6P2C0 686 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF786Q8N393 782 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 KCNH6Q9H252 994 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 METTL7AQ9H8H3 244 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 DMAC2Q9NW81 257 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CFAP20Q9Y6A4 193 aaKnown RBP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF840PA6NDX5 716 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FAM25AB3EWG3 89 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FAM25CB3EWG5 89 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FAM25GB3EWG6 89 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 PDPK1O15530 556 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 ARHGEF9O43307 516 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 LDB2O43679 373 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 UGT2B17O75795 530 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CLDN7O95471 211 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CD48P09326 243 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 HSMCR30P0CW71 290 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 COL6A2P12110 1019 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FGFR3P22607 806 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 NMBRP28336 390 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CLCN7P51798 805 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 PPIDQ08752 370 aaKnown RBP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 DPYSL2Q16555 572 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 CA9Q16790 459 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.94□□□□□ -1.62
SCN3A-203ENST00000409101 SLC44A4Q53GD3 710 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 MBOAT1Q6ZNC8 495 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 NYAP1Q6ZVC0 841 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 HFE2Q6ZVN8 426 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FBXO30Q8TB52 745 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 NEK7Q8TDX7 302 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 FAR1Q8WVX9 515 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 KLHL6Q8WZ60 621 aa4.94□□□□□ -1.62
SCN3A-203ENST00000409101 RMND5BQ96G75 393 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms