RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PYROXD2Q8N2H3 581 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 SPATA22Q8NHS9 363 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 UBE2E3Q969T4 207 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 FCRL2Q96LA5 508 aaPredicted RBP17.46■□□□□ 0.39
SMPD4-202ENST00000409031 TBATAQ96M53 351 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 COL21A1Q96P44 957 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 POLE4Q9NR33 117 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 H3BMQ9 156 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 DPYSL4O14531 572 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 ERN1O75460 977 aaKnown RBP17.46■□□□□ 0.39
SMPD4-202ENST00000409031 PEPDP12955 493 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 HNRNPFP52597 415 aaKnown RBP17.46■□□□□ 0.39
SMPD4-202ENST00000409031 CNTN2Q02246 1040 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 IQCCQ4KMZ1 466 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 UBAP2Q5T6F2 1119 aaKnown RBP17.46■□□□□ 0.39
SMPD4-202ENST00000409031 SH3PXD2AQ5TCZ1 1133 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 COG8Q96MW5 612 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 BCL7BQ9BQE9 202 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 GPR88Q9GZN0 384 aa17.46■□□□□ 0.39
SMPD4-202ENST00000409031 COQ9O75208 318 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 CFHP08603 1231 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 EPORP19235 508 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 SLC5A2P31639 672 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 MADCAM1Q13477 382 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 TEAD4Q15561 434 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 CRTC2Q53ET0 693 aaPredicted RBP17.46■□□□□ 0.38
SMPD4-202ENST00000409031 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 OR2T5Q6IEZ7 315 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 CAND1Q86VP6 1230 aaKnown RBP17.46■□□□□ 0.38
SMPD4-202ENST00000409031 GPRC5AQ8NFJ5 357 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 OR2T29Q8NH02 315 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 GPR21Q99679 349 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 SLC25A51Q9H1U9 297 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 TFB2MQ9H5Q4 396 aaKnown RBP17.46■□□□□ 0.38
SMPD4-202ENST00000409031 PAK1IP1Q9NWT1 392 aaPredicted RBP17.46■□□□□ 0.38
SMPD4-202ENST00000409031 B3GNT3Q9Y2A9 372 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 DHRS7Q9Y394 339 aa17.46■□□□□ 0.38
SMPD4-202ENST00000409031 MYH6P13533 1939 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 MRC1P22897 1456 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 XPNPEP2O43895 674 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 RPS12P25398 132 aaKnown RBP17.45■□□□□ 0.38
SMPD4-202ENST00000409031 AP3S2P59780 193 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 BCL2L1Q07817 233 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 CYP4V2Q6ZWL3 525 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-202ENST00000409031 DDX53Q86TM3 631 aaKnown RBP17.45■□□□□ 0.38
SMPD4-202ENST00000409031 STYXQ8WUJ0 223 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 LGALS12Q96DT0 336 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 C8orf48Q96LL4 319 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 COMMD3Q9UBI1 195 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 REM1O75628 298 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 IFNW1P05000 195 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 BMP7P18075 431 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 GSTM2P28161 218 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 HTR7P34969 479 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 ACOX1Q15067 660 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 SLC35G1Q2M3R5 365 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 LYPLAL1Q5VWZ2 237 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 NAT16Q8N8M0 369 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 DCBLD1Q8N8Z6 715 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 CSGALNACT1Q8TDX6 532 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 SPATC1LQ9H0A9 340 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 RDH8Q9NYR8 311 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 DERAQ9Y315 318 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 PCDHB5Q9Y5E4 795 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 IGKV6D-41A0A0C4DH26 115 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 KPNA5O15131 536 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 TRBC1P01850 177 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 GRM5P41594 1212 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 CPT1AP50416 773 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 CTXN3Q4LDR2 81 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 OR52J3Q8NH60 311 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 FUNDC2Q9BWH2 189 aa17.45■□□□□ 0.38
SMPD4-202ENST00000409031 PAQR5Q9NXK6 330 aaPredicted RBP17.45■□□□□ 0.38
SMPD4-202ENST00000409031 TP73O15350 636 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 PTTG1O95997 202 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 ALDOAP04075 364 aaKnown RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 CDH12P55289 794 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 PLPPR4Q7Z2D5 763 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 LDB1Q86U70 411 aaPredicted RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 CORO1BQ9BR76 489 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 SPON1Q9HCB6 807 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 MARCH2Q9P0N8 246 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 TESMINQ9Y4I5 508 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 SPACA6W5XKT8 324 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 PRRG1O14668 218 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 HPRP00739 348 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 GRIA2P42262 883 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 ASMTP46597 345 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 MAZP56270 477 aaKnown RBP17.44■□□□□ 0.38
SMPD4-202ENST00000409031 TGM3Q08188 693 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 KCNAB2Q13303 367 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 TAPT1Q6NXT6 567 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 DEF8Q6ZN54 512 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 RBFAQ8N0V3 343 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 ABCG8Q9H221 673 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 KCNN2Q9H2S1 579 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 PCDHB1Q9Y5F3 818 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 NR2F1P10589 423 aa17.44■□□□□ 0.38
SMPD4-202ENST00000409031 CES1P23141 567 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms