RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FAM122CQ6P4D5 195 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 TRAT1Q6PIZ9 186 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 DET1Q7L5Y6 550 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 ADIPOR2Q86V24 386 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SNX32Q86XE0 403 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 PM20D2Q8IYS1 436 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 BEST3Q8N1M1 668 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 PCDH20Q8N6Y1 951 aaKnown RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLC38A9Q8NBW4 561 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 MSANTD4Q8NCY6 345 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 GRAMD2BQ96HH9 432 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 RMDN2Q96LZ7 410 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 MGME1Q9BQP7 344 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SYT17Q9BSW7 474 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 GOLPH3LQ9H4A5 285 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 CNOT10Q9H9A5 744 aaKnown RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 COPS7BQ9H9Q2 264 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SEBOXQ9HB31 216 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 PLAC1Q9HBJ0 212 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 EQTNQ9NQ60 294 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 MCM9Q9NXL9 1143 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 NUDCQ9Y266 331 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 GRIP1Q9Y3R0 1128 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 LOXL2Q9Y4K0 774 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 NME7Q9Y5B8 376 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 POGZQ7Z3K3 1410 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 INO80Q9ULG1 1556 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 RPGRIP1LQ68CZ1 1315 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 SCAF11Q99590 1463 aaKnown RBP4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 TRPM1Q7Z4N2 1603 aa4.68□□□□□ -1.66
HMGB3P18-201ENST00000406327 LMTK2Q8IWU2 1503 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 ANXA2P2A6NMY6 339 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 B4DGG1 531 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 PSMD14O00487 310 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZBTB43O43298 467 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 SSX4O60224 188 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 SIX3O95343 332 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 TGDSO95455 350 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 FGF2P09038 288 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 SRCP12931 536 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 ATP6V1B1P15313 513 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CASTP20810 708 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 ACHEP22303 614 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 NMBRP28336 390 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CD38P28907 300 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 C21orf33P30042 268 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 HOXC13P31276 330 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 APOBEC1P41238 236 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 COMPP49747 757 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 POLGP54098 1239 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CDH13P55290 713 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 DDR1Q08345 913 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF273Q14593 569 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 EFNB3Q15768 340 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 SMN1Q16637 294 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 PRTGQ2VWP7 1150 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 TWISTNBQ3B726 338 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 FAM109BQ6ICB4 259 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CAVIN1Q6NZI2 390 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 SHQ1Q6PI26 577 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 MFSD6Q6ZSS7 791 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CTU1Q7Z7A3 348 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 UNC45BQ8IWX7 931 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CEP57L1Q8IYX8 460 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 NUP93Q8N1F7 819 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 RASGEF1CQ8N431 466 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 OIT3Q8WWZ8 545 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 ROBO4Q8WZ75 1007 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLC25A28Q96A46 364 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 TXNDC15Q96J42 360 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 CCDC114Q96M63 670 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 QRFPRQ96P65 431 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 FNBP1Q96RU3 617 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 DNAI2Q9GZS0 605 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 FAM234AQ9H0X4 552 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 WNT5BQ9H1J7 359 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 PPIL3Q9H2H8 161 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 KCNN2Q9H2S1 579 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 DPP3Q9NY33 737 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 RCC2Q9P258 522 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 KNSTRNQ9Y448 316 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 LIPGQ9Y5X9 500 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 LAMC1P11047 1609 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 EIF2AK4Q9P2K8 1649 aaKnown RBP4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 NEO1Q92859 1461 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 RNF123Q5XPI4 1314 aa4.67□□□□□ -1.66
HMGB3P18-201ENST00000406327 INSRP06213 1382 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 EIF3AQ14152 1382 aaKnown RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 NEURL4Q96JN8 1562 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 DEPDC5O75140 1603 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 HTR3EA5X5Y0 456 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 FAM90A26D6RGX4 464 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 I6L893 689 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ANKRD28O15084 1053 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 BUD23O43709 281 aaKnown RBP4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 NDUFS7O75251 213 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 ZNF217O75362 1048 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 CREG1O75629 220 aa4.66□□□□□ -1.66
HMGB3P18-201ENST00000406327 SLCO2B1O94956 709 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms