RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GCAP28676 217 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 CD151P48509 253 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 LRP8Q14114 963 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 DBX2Q6ZNG2 339 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 CFAP206Q8IYR0 622 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 SLC30A3Q99726 388 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 CPNE1Q99829 537 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 TIMM29Q9BSF4 260 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 AARSD1Q9BTE6 412 aaKnown RBP15.66■□□□□ 0.1
HMGA1-204ENST00000401473 TMEM9BQ9NQ34 198 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 TBC1D29Q9UFV1 150 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 GNPTGQ9UJJ9 305 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 PCDHB1Q9Y5F3 818 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 ANKRD12Q6UB98 2062 aa15.66■□□□□ 0.1
HMGA1-204ENST00000401473 C17orf113A0A1B0GUU1 675 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 HMX2A2RU54 273 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 LMO7DNF2Z398 122 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 PCDHGA12O60330 932 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 FOXD2O60548 495 aaPredicted RBP15.65■□□□□ 0.1
HMGA1-204ENST00000401473 RPL10P27635 214 aaKnown RBP15.65■□□□□ 0.1
HMGA1-204ENST00000401473 GP5P40197 560 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 ACTR1BP42025 376 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 CCT8P50990 548 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 CDKN2DP55273 166 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 ACTR1AP61163 376 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 ILF3Q12906 894 aaKnown RBP eCLIP15.65■□□□□ 0.12e-9■□□□□ 8.4
HMGA1-204ENST00000401473 BRD3Q15059 726 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 ELOCQ15369 112 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 DEFB133Q30KQ1 61 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 STPG1Q5TH74 334 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 METRNLQ641Q3 311 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 TAF8Q7Z7C8 310 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 NSMCE4AQ9NXX6 385 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 MTO1Q9Y2Z2 717 aaKnown RBP15.65■□□□□ 0.1
HMGA1-204ENST00000401473 WDFY3Q8IZQ1 3526 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 CCDC151A5D8V7 595 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 POC1B-GALNT4F8VUJ3 575 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 QSOX1O00391 747 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 CHRM3P20309 590 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 AOAHP28039 575 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 PDHA2P29803 388 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 DMPKQ09013 629 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 SLC44A1Q8WWI5 657 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 VPS39Q96JC1 886 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 RBBP8Q99708 897 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 RHOJQ9H4E5 214 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 PRDM8Q9NQV8 689 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 TAAR2Q9P1P5 351 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 CDYLQ9Y232 598 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 WDR37Q9Y2I8 494 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 VWA7Q9Y334 891 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 CSNK1G3Q9Y6M4 447 aa15.65■□□□□ 0.1
HMGA1-204ENST00000401473 FFAR2O15552 330 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 FTH1P02794 183 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 ZNF883P0CG24 379 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 BRAFP15056 766 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 CLCN7P51798 805 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 UAP1L1Q3KQV9 507 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 BEND6Q5SZJ8 279 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-204ENST00000401473 GRTP1Q5TC63 336 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 VRK3Q8IV63 474 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 FSTL5Q8N475 847 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-204ENST00000401473 MREGQ8N565 214 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 GPATCH11Q8N954 259 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 FAM46DQ8NEK8 389 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-204ENST00000401473 GIMAP7Q8NHV1 300 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 ELMO1Q92556 727 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 KCNJ9Q92806 393 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 PAFAH2Q99487 392 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 OLFM1Q99784 485 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 GSDMCQ9BYG8 508 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 OSGEPL1Q9H4B0 414 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 SARS2Q9NP81 518 aaKnown RBP15.64■□□□□ 0.09
HMGA1-204ENST00000401473 LATS2Q9NRM7 1088 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 SCHIP1Q9P0W5 487 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-204ENST00000401473 BTBD3Q9Y2F9 522 aa15.64■□□□□ 0.09
HMGA1-204ENST00000401473 SLC5A10A0PJK1 596 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 A6NCN8 305 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 NEMP2A6NFY4 417 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 TRIM38O00635 465 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 YKT6O15498 198 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 GPC4O75487 556 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CD59P13987 128 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CLCNKAP51800 687 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CSE1LP55060 971 aaKnown RBP15.63■□□□□ 0.09
HMGA1-204ENST00000401473 HSPA14Q0VDF9 509 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 NAB1Q13506 487 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 SEPT7Q16181 437 aaKnown RBP15.63■□□□□ 0.09
HMGA1-204ENST00000401473 HECTD2Q5U5R9 776 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 PIM3Q86V86 326 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 SDR16C5Q8N3Y7 309 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 OR2W6PQ8NHA6 318 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 DCAKDQ8WVC6 231 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 PATE1Q8WXA2 126 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 PANX3Q96QZ0 392 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 GPR21Q99679 349 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 DHRS4Q9BTZ2 278 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 CCDC68Q9H2F9 335 aa15.63■□□□□ 0.09
HMGA1-204ENST00000401473 DPEP2Q9H4A9 486 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms