RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 AKAP7Q9P0M2 348 aaPredicted RBP14□□□□□ -0.17
HDDC2-202ENST00000398153 SCHIP1Q9P0W5 487 aaPredicted RBP14□□□□□ -0.17
HDDC2-202ENST00000398153 PDP2Q9P2J9 529 aa14□□□□□ -0.17
HDDC2-202ENST00000398153 HEBP2Q9Y5Z4 205 aa14□□□□□ -0.17
HDDC2-202ENST00000398153 UNC13CQ8NB66 2214 aa14□□□□□ -0.17
HDDC2-202ENST00000398153 CCDC78A2IDD5 438 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 OR51F1A6NGY5 319 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 LIN7AO14910 233 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-202ENST00000398153 HGSO14964 777 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-202ENST00000398153 NDUFS1P28331 727 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 NMBRP28336 390 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 PDX1P52945 283 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 LIMK2P53671 638 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 DRG2P55039 364 aaKnown RBP13.99□□□□□ -0.17
HDDC2-202ENST00000398153 CRADDP78560 199 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 CLCA4Q14CN2 919 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 MORF4L2Q15014 288 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 SEPT7Q16181 437 aaKnown RBP13.99□□□□□ -0.17
HDDC2-202ENST00000398153 AMZ1Q400G9 498 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 RNF187Q5TA31 235 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-202ENST00000398153 TMEM71Q6P5X7 295 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 SYT10Q6XYQ8 523 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 SDCCAG8Q86SQ7 713 aaPredicted RBP13.99□□□□□ -0.17
HDDC2-202ENST00000398153 LRRC6Q86X45 466 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 LMNTD2Q8IXW0 634 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 CFAP206Q8IYR0 622 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 GPR150Q8NGU9 434 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 CMKLR1Q99788 373 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 NAT9Q9BTE0 207 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 VPS9D1Q9Y2B5 631 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 PCDHB1Q9Y5F3 818 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 COLEC10Q9Y6Z7 277 aa13.99□□□□□ -0.17
HDDC2-202ENST00000398153 AVILO75366 819 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 USP1O94782 785 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 SLC35G4P0C7Q5 338 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 IVDP26440 423 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ADARP55265 1226 aaKnown RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ERVPABLB-1P60509 514 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 CYP4F3Q08477 520 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 RPE65Q16518 533 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ZNF658BQ4V348 819 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 CASC4Q6P4E1 433 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 KLHL35Q6PF15 583 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 FAM83HQ6ZRV2 1179 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 MAATS1Q7Z4T9 603 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 PROSER1Q86XN7 944 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 MARCH9Q86YJ5 346 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 JAMLQ86YT9 394 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 PLXDC1Q8IUK5 500 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 KLHL7Q8IXQ5 586 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 CLDN19Q8N6F1 224 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 SPATA4Q8NEY3 305 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ZCCHC14Q8WYQ9 949 aaKnown RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 MFSD3Q96ES6 412 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ZNF578Q96N58 590 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 CARD6Q9BX69 1037 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 B3GNT4Q9C0J1 378 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 RAB33BQ9H082 229 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 COG4Q9H9E3 785 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ATXN7L1Q9ULK2 861 aaPredicted RBP13.98□□□□□ -0.17
HDDC2-202ENST00000398153 WDR37Q9Y2I8 494 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 ASPMQ8IZT6 3477 aa13.98□□□□□ -0.17
HDDC2-202ENST00000398153 PIKFYVEQ9Y2I7 2098 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 OR52A4PA6NMU1 304 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 KIF2AO00139 706 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 IFRD1O00458 451 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 PRMT5O14744 637 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 KPNA5O15131 536 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 TOX3O15405 576 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 UBXN7O94888 489 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 VAPBO95292 243 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 TTC4O95801 387 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 POLBP06746 335 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 PRSS56P0CW18 603 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 MTHFD1P11586 935 aaKnown RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 OGNP20774 298 aaKnown RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 RPS3P23396 243 aaKnown RBP eCLIP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 PBLDP30039 288 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 ARCN1P48444 511 aaKnown RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 GABREP78334 506 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 DNAJC21Q5F1R6 531 aaKnown RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 IZUMO3Q5VZ72 239 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 USP53Q70EK8 1073 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 RAB11FIP2Q7L804 512 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 ZNF572Q7Z3I7 529 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 C17orf53Q8N3J3 647 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 BBOF1Q8ND07 529 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 GABPB2Q8TAK5 448 aaPredicted RBP13.97□□□□□ -0.17
HDDC2-202ENST00000398153 LRRC39Q96DD0 335 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 SNF8Q96H20 258 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 SIGLEC10Q96LC7 697 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 SLC46A1Q96NT5 459 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 RDH14Q9HBH5 336 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 EPB41L5Q9HCM4 733 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
HDDC2-202ENST00000398153 RPS6KL1Q9Y6S9 549 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms