RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 TDRD1Q9BXT4 1180 aaKnown RBP7.87□□□□□ -1.15
NUP98-206ENST00000397013 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.87□□□□□ -1.15
NUP98-206ENST00000397013 HAUS4Q9H6D7 363 aa7.87□□□□□ -1.15
NUP98-206ENST00000397013 MLXIPLQ9NP71 852 aa7.87□□□□□ -1.15
NUP98-206ENST00000397013 LATS2Q9NRM7 1088 aa7.87□□□□□ -1.15
NUP98-206ENST00000397013 VPS18Q9P253 973 aa7.87□□□□□ -1.15
NUP98-206ENST00000397013 LIMA1Q9UHB6 759 aaKnown RBP7.87□□□□□ -1.15
NUP98-206ENST00000397013 ERRFI1Q9UJM3 462 aaPredicted RBP7.87□□□□□ -1.15
NUP98-206ENST00000397013 SHOC2Q9UQ13 582 aa7.87□□□□□ -1.15
NUP98-206ENST00000397013 PCDHGA6Q9Y5G7 932 aa7.87□□□□□ -1.15
NUP98-206ENST00000397013 LILRA5A6NI73 299 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 PDZK1P1A8MUH7 402 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 EIF3CLB5ME19 914 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 AURKAO14965 403 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 ZNF185O15231 689 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 OIP5O43482 229 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 MFSD11O43934 449 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 SLC4A1P02730 911 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 ATP1A3P13637 1013 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 FERP16591 822 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 ZNF7P17097 686 aaPredicted RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 NELFEP18615 380 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 ARL4AP40617 200 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 PGDP52209 483 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 CDH6P55285 790 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 ITGA1P56199 1179 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 SLC10A2Q12908 348 aaPredicted RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 GALNT3Q14435 633 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 IL11RAQ14626 422 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 RPS26P11Q5JNZ5 115 aaPredicted RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 JMJD6Q6NYC1 403 aaPredicted RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 TREML4Q6UXN2 200 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 PPP1R3BQ86XI6 285 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 PSTKQ8IV42 348 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 AOPEPQ8N6M6 819 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 RBMXL3Q8N7X1 1067 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 FDCSPQ8NFU4 85 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 MAML1Q92585 1016 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 EIF3CQ99613 913 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 MAP3K3Q99759 626 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 SLC25A23Q9BV35 468 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 MLPHQ9BV36 600 aaPredicted RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 NUDT9Q9BW91 350 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 CEP41Q9BYV8 373 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 ING2Q9H160 280 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 NUP62CLQ9H1M0 184 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 CARD9Q9H257 536 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 STN1Q9H668 368 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 PCDH9Q9HC56 1237 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 SLC40A1Q9NP59 571 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 SRPK3Q9UPE1 567 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 FARSAQ9Y285 508 aaKnown RBP7.86□□□□□ -1.15
NUP98-206ENST00000397013 AKAP9Q99996 3911 aa7.86□□□□□ -1.15
NUP98-206ENST00000397013 TNRC6AQ8NDV7 1962 aaKnown RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 GOLGA6L3A6NEY3 463 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 WIPF3A6NGB9 483 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 LRRC10BA6NIK2 292 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 LRRC53A6NM62 1247 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 MATN3O15232 486 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 GPR39O43194 453 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 SLC25A14O95258 325 aaPredicted RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 LCA5LO95447 670 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 RECKO95980 971 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 JCHAINP01591 159 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 PRF1P14222 555 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 ZNF30P17039 623 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 NFKBIAP25963 317 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 PTPN4P29074 926 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 PCK1P35558 622 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 GARSP41250 739 aaKnown RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 CD86P42081 329 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 NOP2P46087 812 aaKnown RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 ARCN1P48444 511 aaKnown RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 ARSEP51690 589 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 CLCNKAP51800 687 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 FOXL2P58012 376 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 SLC25A11Q02978 314 aaKnown RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 GBE1Q04446 702 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 GALNT2Q10471 571 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 GPS2Q13227 327 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 GPR19Q15760 415 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 UGT8Q16880 541 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 PLEKHN1Q494U1 663 aaPredicted RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 BOLA3Q53S33 107 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 NCBP2-AS2Q69YL0 99 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 FAM83HQ6ZRV2 1179 aaPredicted RBP7.85□□□□□ -1.15
NUP98-206ENST00000397013 PRSS42Q7Z5A4 293 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 C11orf96Q7Z7L8 435 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 PHYKPLQ8IUZ5 450 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 TRIM48Q8IWZ4 208 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 BBS5Q8N3I7 341 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 CNTD1Q8N815 330 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 GPR150Q8NGU9 434 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 NSMCE1Q8WV22 266 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 SLC41A2Q96JW4 573 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 ERGIC2Q96RQ1 377 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 SPATA16Q9BXB7 569 aa7.85□□□□□ -1.15
NUP98-206ENST00000397013 POLR1EQ9GZS1 481 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms