RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 OR13C4Q8NGS5 318 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 NKD1Q969G9 470 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 PMEPA1Q969W9 287 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 KIAA1143Q96AT1 154 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-205ENST00000395794 CTRCQ99895 268 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 ARHGAP9Q9BRR9 750 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 FAM96AQ9H5X1 160 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 VPS37BQ9H9H4 285 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
CXCL12-205ENST00000395794 ZNF148Q9UQR1 794 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 LOC400499M0QZD8 3231 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 TCRBV7S2A1N4TA0A589 114 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 ERI2A8K979 691 aaKnown RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 LDB2O43679 373 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 RAD1O60671 282 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 AP2A1O95782 977 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 IFNB1P01574 187 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 C9P02748 559 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 PRB1P04280 392 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 CCDC175P0C221 793 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 MTHFD1P11586 935 aaKnown RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 MAP4P27816 1152 aaKnown RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 MC4RP32245 332 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 CA5AP35218 305 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 XIAPP98170 497 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 LAMB3Q13751 1172 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 POU6F1Q14863 301 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 BCL7AQ4VC05 210 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 ZRANB3Q5FWF4 1079 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 CACHD1Q5VU97 1274 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 KCTD11Q693B1 232 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 ARMC6Q6NXE6 501 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 FAM83HQ6ZRV2 1179 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 SLC13A5Q86YT5 568 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 KLHDC8BQ8IXV7 354 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 CFAP206Q8IYR0 622 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 CCDC89Q8N998 374 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 ATG4AQ8WYN0 398 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 RTP4Q96DX8 246 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 CCM2Q9BSQ5 444 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 WWP1Q9H0M0 922 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 TRIT1Q9H3H1 467 aaKnown RBP13.46□□□□□ -0.25
CXCL12-205ENST00000395794 OGFRQ9NZT2 677 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 FAM8A1Q9UBU6 413 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 COLEC10Q9Y6Z7 277 aa13.46□□□□□ -0.25
CXCL12-205ENST00000395794 AGAP14A8MT82 685 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 CCL22O00626 93 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 LIASO43766 372 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 ITGB2P05107 769 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 POLBP06746 335 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 FDFT1P37268 417 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 LEPRP48357 1165 aaKnown RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 ARL4DP49703 201 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 SEPHS1P49903 392 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 GDF10P55107 478 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 SRSF6Q13247 344 aaKnown RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 MSLNQ13421 630 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 SKIDA1Q1XH10 827 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 XKR5Q6UX68 686 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 PPP1R21Q6ZMI0 780 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 FAM92BQ6ZTR7 304 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 NLGN4XQ8N0W4 816 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 NLGN4YQ8NFZ3 816 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 HM13Q8TCT9 377 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 STYXQ8WUJ0 223 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 ZFPM2Q8WW38 1151 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 TTC9Q92623 222 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 RSC1A1Q92681 617 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 LINC00615Q96LM1 132 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 C12orf66Q96MD2 445 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 EFHD1Q9BUP0 239 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 RAB33BQ9H082 229 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 NLE1Q9NVX2 485 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-205ENST00000395794 ZDHHC3Q9NYG2 299 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 EPHA6Q9UF33 1036 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 HEBP2Q9Y5Z4 205 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 PTPRQQ9UMZ3 2332 aa13.45□□□□□ -0.26
CXCL12-205ENST00000395794 C17orf113A0A1B0GUU1 675 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 H7C0S8 307 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 STK17BO94768 372 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 ACRV1P26436 265 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 NDUFS1P28331 727 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 ARSDP51689 593 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 CACNG1Q06432 222 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 CDH17Q12864 832 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 SNX1Q13596 522 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 IL11RAQ14626 422 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 MEI1Q5TIA1 1274 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 PRSS42Q7Z5A4 293 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 SERPINA9Q86WD7 417 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 RASGRP3Q8IV61 690 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 GPR150Q8NGU9 434 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 C1orf54Q8WWF1 131 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 UBXN4Q92575 508 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms