RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 MAGED4Q96JG8 741 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 GFI1Q99684 422 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 GPATCH1Q9BRR8 931 aaKnown RBP2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 STRA6Q9BX79 667 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 TMEM39BQ9GZU3 492 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 P2RY12Q9H244 342 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RANGRFQ9HD47 186 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MBNL1Q9NR56 388 aaKnown RBP2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 OLFML3Q9NRN5 406 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RNF186Q9NXI6 227 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 DLGAP2Q9P1A6 1054 aa2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 KLF2Q9Y5W3 355 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1040P-201ENST00000383974 A0A1W2PRG0 241 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 H3BQ06 376 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ZNF217O75362 1048 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 CLDN1O95832 211 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 PRG2P13727 222 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 SELLP14151 372 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RARSP54136 660 aaKnown RBP2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ZBED6P86452 979 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MS4A2Q01362 244 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 CDR2Q01850 454 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 COX10Q12887 443 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 PRKAA1Q13131 559 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 PEX6Q13608 980 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RAPSNQ13702 412 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MVPQ14764 893 aaKnown RBP2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 LRIF1Q5T3J3 769 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 SLC9C2Q5TAH2 1124 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ZNF343Q6P1L6 599 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 PSRC1Q6PGN9 363 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 DENND5BQ6ZUT9 1274 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 CNTROBQ8N137 903 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 Q8N377 158 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 DNAJC22Q8N4W6 341 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RAB42Q8N4Z0 105 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 L3MBTL4Q8NA19 623 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 OR2L2Q8NH16 312 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ZFAND2BQ8WV99 257 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 HVCN1Q96D96 273 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 UBXN10Q96LJ8 280 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 PIP5K1AQ99755 562 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 LRRC61Q9BV99 259 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 CLEC7AQ9BXN2 247 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 EPB41L5Q9HCM4 733 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 INTS9Q9NV88 658 aaKnown RBP2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MIOSQ9NXC5 875 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MTMR10Q9NXD2 777 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 TAB2Q9NYJ8 693 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 GGA3Q9NZ52 723 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 FLRT3Q9NZU0 649 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 EPHA6Q9UF33 1036 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 SLC7A7Q9UM01 511 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 CROCCQ5TZA2 2017 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 KDM3AQ9Y4C1 1321 aa2.13□□□□□ -2.07
RNU6-1040P-201ENST00000383974 A0A1W2PQF6 199 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MEX3AA1L020 520 aaKnown RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 TMEM189-UBE2V1I3L0A0 370 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 LDHAP00338 332 aaKnown RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 UGT1A4P22310 534 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 EPHA8P29322 1005 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ICAM3P32942 547 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 HNF4AP41235 474 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 HALP42357 657 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 PTGER3P43115 390 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 MAGEA11P43364 429 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 HARS2P49590 506 aaKnown RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 UBE2V1Q13404 147 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 OS9Q13438 667 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 FRG1Q14331 258 aaKnown RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 NECTIN1Q15223 517 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 SGSM1Q2NKQ1 1148 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 TAF1BQ53T94 588 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ZNF534Q76KX8 674 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 C11orf53Q8IXP5 236 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 DCLK2Q8N568 766 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 HTRA1Q92743 480 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 GCC1Q96CN9 775 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 NSMCE3Q96MG7 304 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ARPC5LQ9BPX5 153 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RAB11FIP5Q9BXF6 653 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 UPF3AQ9H1J1 476 aaKnown RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ERAP1Q9NZ08 941 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 NAALADL1Q9UQQ1 740 aa2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 R3HDM2Q9Y2K5 976 aaKnown RBP2.12□□□□□ -2.07
RNU6-1040P-201ENST00000383974 J3QR06 171 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ATP6V0E1O15342 81 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 TGFB1I1O43294 461 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 KHDRBS3O75525 346 aaKnown RBP2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 SLC25A12O75746 678 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 SEC14L2O76054 403 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 H1F0P07305 194 aaKnown RBP2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ZSCAN5DPP0CG00 497 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 ACP2P11117 423 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 RPS18P62269 152 aaKnown RBP2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 OLR1P78380 273 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 CEBPZQ03701 1054 aaKnown RBP2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 LGALS3BPQ08380 585 aa2.11□□□□□ -2.07
RNU6-1040P-201ENST00000383974 DRP2Q13474 957 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms