RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PBLDP30039 288 aaPredicted RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 MAGEA4P43358 317 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 CARSP49589 748 aaKnown RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 ILKQ13418 452 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 CUL1Q13616 776 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 KIR2DS5Q14953 304 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 ZNF789Q5FWF6 425 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 PPM1JQ5JR12 505 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 TEDDM1Q5T9Z0 273 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 TRMT10BQ6PF06 316 aaKnown RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 RELL1Q8IUW5 271 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 PALM2Q8IXS6 379 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 IFT20Q8IY31 132 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 CFAP206Q8IYR0 622 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 C2CD4AQ8NCU7 369 aaPredicted RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 GABPB2Q8TAK5 448 aaPredicted RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 PATE1Q8WXA2 126 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 RHOXF2Q9BQY4 288 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 TSPYL1Q9H0U9 437 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 SCHIP1Q9P0W5 487 aaPredicted RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 WDR37Q9Y2I8 494 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 PCDHB1Q9Y5F3 818 aa18.39■□□□□ 0.53
SSU72-203ENST00000378725 ARID1BQ8NFD5 2236 aaPredicted RBP18.39■□□□□ 0.53
SSU72-203ENST00000378725 NUDT21O43809 227 aaKnown RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 ESR1P03372 595 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 FTH1P19P0C7X4 201 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 PNLIPP16233 465 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 GLB1P16278 677 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 XRCC1P18887 633 aaPredicted RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 RPL10P27635 214 aaKnown RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 SLC1A2P43004 574 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 LEPRP48357 1165 aaKnown RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 MAZP56270 477 aaKnown RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 GUSBP11Q6P575 273 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 KIAA0408Q6ZU52 694 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 GALNT7Q86SF2 657 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 LILRA3Q8N6C8 439 aaPredicted RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 NAT6Q93015 286 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 COG4Q9H9E3 785 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 MTRF1LQ9UGC7 380 aaKnown RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 GNPTGQ9UJJ9 305 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 APOBEC2Q9Y235 224 aaKnown RBP18.38■□□□□ 0.53
SSU72-203ENST00000378725 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 CEP250Q9BV73 2442 aa18.38■□□□□ 0.53
SSU72-203ENST00000378725 CFAP54Q96N23 3096 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 TRBV23OR9-2A0A075B6M9 112 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 UBA6A0AVT1 1052 aaPredicted RBP18.37■□□□□ 0.53
SSU72-203ENST00000378725 CPED1A4D0V7 1026 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 HAUS5O94927 633 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 CDK4P11802 303 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 SSTR1P30872 391 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 FMO4P31512 558 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 FASLGP48023 281 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 GPX6P59796 221 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 TUBB4BP68371 445 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 MGAT5Q09328 741 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 RPA4Q13156 261 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 CLCA4Q14CN2 919 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 CTSL3PQ5NE16 218 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 PTRHD1Q6GMV3 140 aaKnown RBP18.37■□□□□ 0.53
SSU72-203ENST00000378725 ZNF449Q6P9G9 518 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 CEP128Q6ZU80 1094 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 C3orf62Q6ZUJ4 267 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 EFL1Q7Z2Z2 1120 aaKnown RBP18.37■□□□□ 0.53
SSU72-203ENST00000378725 DGLUCYQ7Z3D6 616 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 ZNF438Q7Z4V0 828 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 CCDC25Q86WR0 208 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 IFI44Q8TCB0 444 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 MAPK15Q8TD08 544 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 SLC37A2Q8TED4 501 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 C9orf72Q96LT7 481 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 TSSK1BQ9BXA7 367 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 FBXO6Q9NRD1 293 aaPredicted RBP18.37■□□□□ 0.53
SSU72-203ENST00000378725 ZNF624Q9P2J8 865 aaPredicted RBP18.37■□□□□ 0.53
SSU72-203ENST00000378725 LRIT1Q9P2V4 623 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 CRYL1Q9Y2S2 319 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 RNF215Q9Y6U7 377 aa18.37■□□□□ 0.53
SSU72-203ENST00000378725 SLC5A10A0PJK1 596 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 IQCF5A8MTL0 148 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 PDZK1P1A8MUH7 402 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 H3BMM5 538 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 LIN7AO14910 233 aaPredicted RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 PPM1DO15297 605 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 RFPL3O75679 317 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 AHSGP02765 367 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 PKMP14618 531 aaKnown RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 GABRB3P28472 473 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 CCR7P32248 378 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 SLC19A1P41440 591 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 EIF3BP55884 814 aaKnown RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 UBE2IP63279 158 aaKnown RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 MPP1Q00013 466 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 E2F1Q01094 437 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 PLOD1Q02809 727 aaPredicted RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 NR1D2Q14995 579 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 SEPT7Q16181 437 aaKnown RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 PERM1Q5SV97 790 aa18.36■□□□□ 0.53
SSU72-203ENST00000378725 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.36■□□□□ 0.53
SSU72-203ENST00000378725 CAPRIN2Q6IMN6 1127 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms