RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 SPATA2LQ8IUW3 424 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 CCDC185Q8N715 623 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 AUTS2Q8WXX7 1259 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ELMO2Q96JJ3 720 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 SEPT5Q99719 369 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 SLIRPQ9GZT3 109 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 IL1RL2Q9HB29 575 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ABCD2Q9UBJ2 740 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 BOLA1Q9Y3E2 137 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 C5orf42Q9H799 3197 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 MAGEB16A2A368 324 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 NPHS1O60500 1241 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 MOCS2O96007 188 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 PCSK1P29120 753 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 PGFP49763 221 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 TAGLNQ01995 201 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 DAG1Q14118 895 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 CTXN3Q4LDR2 81 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 COLEC12Q5KU26 742 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 HEATR6Q6AI08 1181 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 CD300LGQ6UXG3 332 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 THEM5Q8N1Q8 247 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 CHDHQ8NE62 594 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 OR5H6Q8NGV6 325 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 SNRNP25Q9BV90 132 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 CEP41Q9BYV8 373 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 PIH1D1Q9NWS0 290 aaKnown RBP12.01□□□□□ -0.49
C9orf3-203ENST00000375315 FBXO5Q9UKT4 447 aa12.01□□□□□ -0.49
C9orf3-203ENST00000375315 ENPP1P22413 925 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 DDOSTP39656 456 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 HTR3AP46098 478 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SLC11A1P49279 550 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 NKX3-2P78367 333 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 TBPL2Q6SJ96 375 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 CYP20A1Q6UW02 462 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 CES3Q6UWW8 571 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 STRADAQ7RTN6 431 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 CLYBLQ8N0X4 340 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 METTL4Q8N3J2 472 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 CELF2-AS1Q8N7Q2 184 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 AURKBQ96GD4 344 aaPredicted RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 UBXN10Q96LJ8 280 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 MMP27Q9H306 513 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SYTL2Q9HCH5 934 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 TOR4AQ9NXH8 423 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PCDHB3Q9Y5E6 796 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PTGES3LE9PB15 166 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 USP12O75317 370 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 YES1P07947 543 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 HMBSP08397 361 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 NAGAP17050 411 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PCMT1P22061 227 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 RPL9P32969 192 aaKnown RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 HADHAP40939 763 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 HTR2BP41595 481 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 GLRBP48167 497 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PRMT2P55345 433 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 EPS8Q12929 822 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 MEP1AQ16819 746 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 LRRC26Q2I0M4 334 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PAPD5Q8NDF8 572 aaKnown RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 PCDH19Q8TAB3 1148 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 STYXQ8WUJ0 223 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PIK3R3Q92569 461 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 TM9SF3Q9HD45 589 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 TLR9Q9NR96 1032 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SAGE1Q9NXZ1 904 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 NDUFAF1Q9Y375 327 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 AGAP5A6NIR3 686 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 C12orf71A8MTZ7 269 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 hCG_2039718K7EN88 272 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 GABRDO14764 452 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SYN1P17600 705 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 ALOX12P18054 663 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 IL32P24001 234 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 GPLD1P80108 840 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PSMD5Q16401 504 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SPATS1Q496A3 300 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 FAM26DQ5JW98 314 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PNCKQ6P2M8 343 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 GDPD3Q7L5L3 318 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 PIWIL4Q7Z3Z4 852 aaKnown RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 SDCCAG3Q96C92 435 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 DMRTB1Q96MA1 342 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 RDH12Q96NR8 316 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 C2orf49Q9BVC5 232 aaPredicted RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 BTBD2Q9BX70 525 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 ALOXE3Q9BYJ1 711 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 DDIT4Q9NX09 232 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SLC39A10Q9ULF5 831 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 RUVBL2Q9Y230 463 aaKnown RBP12□□□□□ -0.49
C9orf3-203ENST00000375315 NAALAD2Q9Y3Q0 740 aa12□□□□□ -0.49
C9orf3-203ENST00000375315 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ARHGAP33O14559 1287 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms