RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RENBPP51606 427 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 DNASE1L3Q13609 305 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 UPP1Q16831 310 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 ANKRD34AQ69YU3 496 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 MRNIPQ6NTE8 343 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 FRA10AC1Q70Z53 315 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 SYVN1Q86TM6 617 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 HID1Q8IV36 788 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 RIMKLAQ8IXN7 391 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM86AQ8N2M4 240 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PARP8Q8N3A8 854 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CHDHQ8NE62 594 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 OR13C4Q8NGS5 318 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 NUDT8Q8WV74 236 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 HDAC2Q92769 488 aaKnown RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CORO1BQ9BR76 489 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 HERC2P3Q9BVR0 1158 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 MROQ9BYG7 248 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 SP110Q9HB58 689 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 FAM118AQ9NWS6 357 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 MTRRQ9UBK8 725 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CASTOR2A6NHX0 329 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 HTR1AP08908 422 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 TIAL1Q01085 375 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 SEMA3AQ14563 771 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 IHHQ14623 411 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PGS1Q32NB8 556 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PLA2G4EQ3MJ16 856 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 ATP6AP1LQ52LC2 224 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PAQR3Q6TCH7 311 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 SPESP1Q6UW49 350 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 FAM86B1Q8N7N1 296 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 C3orf58Q8NDZ4 430 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 OR2T11Q8NH01 316 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 STAG3L4Q8TBR4 150 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CASP10Q92851 521 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 KLHL25Q9H0H3 589 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 COMMD8Q9NX08 183 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 FNDC1Q4ZHG4 1894 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CCDC162PA2VCL2 907 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 MROH6A6NGR9 719 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 AQP9O43315 295 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 TULP3O75386 442 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 ECI2O75521 394 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CLTBP09497 229 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 RPS3AP61247 264 aaKnown RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 PRKG2Q13237 762 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 MAPK11Q15759 364 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CRY1Q16526 586 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CTU2Q2VPK5 515 aaKnown RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 UGT3A1Q6NUS8 523 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 SLC16A12Q6ZSM3 486 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CADM3Q8N126 398 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 CDYL2Q8N8U2 506 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 ZFP90Q8TF47 636 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 FKBP10Q96AY3 582 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 HMCESQ96FZ2 354 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 HGH1Q9BTY7 390 aa10.95□□□□□ -0.66
CCDC40-203ENST00000374877 WDR12Q9GZL7 423 aaKnown RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 TFB2MQ9H5Q4 396 aaKnown RBP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC40-203ENST00000374877 MIA3Q5JRA6 1907 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ZBBXA8MT70 800 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM189-UBE2V1I3L0A0 370 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 M0R3G1 203 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 CDC7O00311 574 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 GSTA4O15217 222 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 LDB2O43679 373 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 KERAO60938 352 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 GJB3O75712 270 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 CST1P01037 141 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 HAPLN1P10915 354 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-203ENST00000374877 PGFP49763 221 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 DSC1Q08554 894 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 CD47Q08722 323 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 KCNAB2Q13303 367 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 DPY19L1Q2PZI1 675 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 CLLU1OSQ5K130 101 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 BRMS1LQ5PSV4 323 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 SULT1C3Q6IMI6 304 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 NECAB2Q7Z6G3 386 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 GALNT7Q86SF2 657 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 OR7A2PQ8NGA2 310 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 RHEBL1Q8TAI7 183 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM209Q96SK2 561 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 C17orf80Q9BSJ5 609 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ATP13A1Q9HD20 1204 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 LIMD1Q9UGP4 676 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ENPP5Q9UJA9 477 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 IKZF3Q9UKT9 509 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 FAM234BA2RU67 622 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 NPEPPSL1A6NEC2 478 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 HS6ST1O60243 411 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 PCSK1P29120 753 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 FMO4P31512 558 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 DGKQP52824 942 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ERVK-8P63133 956 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 CBX2Q14781 532 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms