RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 LZTFL1Q9NQ48 299 aa18.85■□□□□ 0.61
TRAPPC3-204ENST00000373166 CNOT6Q9ULM6 557 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-204ENST00000373166 AAR2Q9Y312 384 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-204ENST00000373166 PIPSLA2A3N6 862 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 CDC14CA4D256 554 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 KIAA0754O94854 1291 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 RECKO95980 971 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 GNLYP22749 145 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 PSMB4P28070 264 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 UQCRFS1P47985 274 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 GFERP55789 205 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 CCZ1BP86790 482 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 CCZ1P86791 482 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 KLF1Q13351 362 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 PDPK2PQ6A1A2 396 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 CAPRIN2Q6IMN6 1127 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 GLT6D1Q7Z4J2 308 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 TRAM1L1Q8N609 369 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 GPR26Q8NDV2 337 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 LRRC45Q96CN5 670 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 RNF31Q96EP0 1072 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 TGM7Q96PF1 710 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 FICDQ9BVA6 458 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 GRPEL1Q9HAV7 217 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 PADI1Q9ULC6 663 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 PCDHGA6Q9Y5G7 932 aa18.84■□□□□ 0.61
TRAPPC3-204ENST00000373166 GRID2O43424 1007 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 CREG1O75629 220 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 UBXN7O94888 489 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 BPIP17213 487 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 TYRP1P17643 537 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 AMD1P17707 334 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 HMGCLP35914 325 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 SEPHS1P49903 392 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 UBE2IP63279 158 aaKnown RBP18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 SH3BP2P78314 561 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZNF662Q6ZS27 426 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 ARHGEF18Q6ZSZ5 1173 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 TMEM135Q86UB9 458 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 APLFQ8IW19 511 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 CCDC110Q8TBZ0 833 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 CPT1CQ8TCG5 803 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 BLOC1S5Q8TDH9 187 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 SSC4DQ8WTU2 575 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 ELMO2Q96JJ3 720 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 PLEKHG4BQ96PX9 1271 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 CARD9Q9H257 536 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZNF768Q9H5H4 540 aaKnown RBP18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 OGFRQ9NZT2 677 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 LNPEPQ9UIQ6 1025 aa18.83■□□□□ 0.6
TRAPPC3-204ENST00000373166 GOLGA6L3A6NEY3 463 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 AURKAO14965 403 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 NUAK1O60285 661 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 RASSF9O75901 435 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 VIPP01282 170 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 MT-ND3P03897 115 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 XRCC1P18887 633 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 CLCNKAP51800 687 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 RPS6KA1Q15418 735 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 ZDHHC20Q5W0Z9 365 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 TMEM26Q6ZUK4 368 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 TRIM48Q8IWZ4 208 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 GORASP1Q9BQQ3 440 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 OSGEPL1Q9H4B0 414 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 BPIFA1Q9NP55 256 aa18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 R3HDM2Q9Y2K5 976 aaKnown RBP18.82■□□□□ 0.6
TRAPPC3-204ENST00000373166 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 SPAG6O75602 509 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 SLC25A14O95258 325 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 AGTP01019 485 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 FGF5P12034 268 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 SEMA5AQ13591 1074 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 DNASE1L3Q13609 305 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 MEI1Q5TIA1 1274 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 CYB5D1Q6P9G0 228 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 PPP1R3BQ86XI6 285 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 TTC30BQ8N4P2 665 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 FAM71DQ8N9W8 422 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 SLC35B2Q8TB61 432 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 SEC14L1Q92503 715 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 GLYATL1Q969I3 302 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 KLC4Q9NSK0 619 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 ATXN10Q9UBB4 475 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 PKP3Q9Y446 797 aa18.81■□□□□ 0.6
TRAPPC3-204ENST00000373166 SPTBN1Q01082 2364 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 TCRBV7S2A1N4TA0A589 114 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 C21orf140B9A014 251 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 PDGFAP04085 211 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 SPAM1P38567 509 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 LEPRP48357 1165 aaKnown RBP18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 TRIM58Q8NG06 486 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 TBL1YQ9BQ87 522 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 FRMD8P1Q9BZ68 369 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 OR2AG1Q9H205 316 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 LHX9Q9NQ69 397 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 CUEDC1Q9NWM3 386 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.8■□□□□ 0.63e-6■■■■□ 22.9
TRAPPC3-204ENST00000373166 SLC30A1Q9Y6M5 507 aa18.8■□□□□ 0.6
TRAPPC3-204ENST00000373166 ENO4A6NNW6 628 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms