RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ATG13O75143 517 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 PAK4O96013 591 aaPredicted RBP19.12■□□□□ 0.65
CHTOP-204ENST00000368694 CBSLP0DN79 551 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 CBSP35520 551 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 SFSWAPQ12872 951 aaKnown RBP19.12■□□□□ 0.65
CHTOP-204ENST00000368694 WSCD2Q2TBF2 565 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 ARL13AQ5H913 290 aaPredicted RBP19.12■□□□□ 0.65
CHTOP-204ENST00000368694 TMEM220Q6QAJ8 160 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 USP30Q70CQ3 517 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 WDR75Q8IWA0 830 aaKnown RBP19.12■□□□□ 0.65
CHTOP-204ENST00000368694 FBXO39Q8N4B4 442 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 MAFAQ8NHW3 353 aaPredicted RBP19.12■□□□□ 0.65
CHTOP-204ENST00000368694 C10orf82Q8WW14 230 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 HMGB4Q8WW32 186 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 COL6A3P12111 3177 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 CCDC189A1A4V9 331 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 SNX2O60749 519 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 CHRNB1P11230 501 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 PRLHRP49683 370 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 HERVK_113P63132 956 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 PRKCQQ04759 706 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 GTF2H3Q13889 308 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 HEATR4Q86WZ0 1026 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 TRAPPC5Q8IUR0 188 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 ZNF781Q8N8C0 355 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 ERVK-6Q9BXR3 956 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 FAM126AQ9BYI3 521 aaPredicted RBP19.12■□□□□ 0.65
CHTOP-204ENST00000368694 SHCBP1LQ9BZQ2 653 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 TRIM39Q9HCM9 518 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 CD93Q9NPY3 652 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 CD274Q9NZQ7 290 aa19.12■□□□□ 0.65
CHTOP-204ENST00000368694 NPHS1O60500 1241 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 SUPT7LO94864 414 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 ENO3P13929 434 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-204ENST00000368694 GABRG2P18507 467 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 IMPDH1P20839 514 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 PBLDP30039 288 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-204ENST00000368694 MAT2AP31153 395 aaKnown RBP19.11■□□□□ 0.65
CHTOP-204ENST00000368694 ZP2Q05996 745 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 IFT88Q13099 833 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 UBXN2BQ14CS0 331 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 TGFBIQ15582 683 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 SYTL3Q4VX76 610 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 ZNF678Q5SXM1 525 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 SBSNQ6UWP8 590 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 RPS27LQ71UM5 84 aaKnown RBP19.11■□□□□ 0.65
CHTOP-204ENST00000368694 ADGRG6Q86SQ4 1221 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 PGBD3Q8N328 593 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 PLCD4Q9BRC7 762 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 ILKAPQ9H0C8 392 aaPredicted RBP19.11■□□□□ 0.65
CHTOP-204ENST00000368694 PREBQ9HCU5 417 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 PNPOQ9NVS9 261 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 USH1CQ9Y6N9 552 aa19.11■□□□□ 0.65
CHTOP-204ENST00000368694 HGSO14964 777 aaPredicted RBP19.1■□□□□ 0.65
CHTOP-204ENST00000368694 TARSP26639 723 aaKnown RBP19.1■□□□□ 0.65
CHTOP-204ENST00000368694 ARFIP2P53365 341 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 FGL2Q14314 439 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 AGERQ15109 404 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 IRF4Q15306 451 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 PLEKHS1Q5SXH7 462 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 ADAMTSL4Q6UY14 1074 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 ASZ1Q8WWH4 475 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 L3HYPDHQ96EM0 354 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 CNDP1Q96KN2 507 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 RMDN2Q96LZ7 410 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 CCM2Q9BSQ5 444 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 TMEM120AQ9BXJ8 343 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 SLC17A9Q9BYT1 436 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 LMAN1LQ9HAT1 526 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 POLMQ9NP87 494 aaPredicted RBP19.1■□□□□ 0.65
CHTOP-204ENST00000368694 MBNL1Q9NR56 388 aaKnown RBP19.1■□□□□ 0.65
CHTOP-204ENST00000368694 ATXN10Q9UBB4 475 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 MRPS17Q9Y2R5 130 aaKnown RBP19.1■□□□□ 0.65
CHTOP-204ENST00000368694 SIX3O95343 332 aaPredicted RBP19.1■□□□□ 0.65
CHTOP-204ENST00000368694 LRRC32Q14392 662 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 INPP5AQ14642 412 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 TMEM259Q4ZIN3 620 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 DOK6Q6PKX4 331 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 HORMAD1Q86X24 394 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 C1QTNF7Q9BXJ2 289 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 ADAMTS6Q9UKP5 1117 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 RAP2CQ9Y3L5 183 aa19.1■□□□□ 0.65
CHTOP-204ENST00000368694 TMEM202A6NGA9 273 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 EIF3FO00303 357 aaPredicted RBP19.09■□□□□ 0.65
CHTOP-204ENST00000368694 S100BP04271 92 aaPredicted RBP19.09■□□□□ 0.65
CHTOP-204ENST00000368694 MPSTP25325 297 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 SERPINB5P36952 375 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 TPMTP51580 245 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 HK3P52790 923 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 AQP5P55064 265 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 CDK3Q00526 305 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 FBXO48Q5FWF7 155 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 FRMD7Q6ZUT3 714 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 C1QTNF2Q9BXJ5 285 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 EPHX3Q9H6B9 360 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 KCNK13Q9HB14 408 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 NUDT4Q9NZJ9 180 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 KRBA1A5PL33 1030 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 RAD51BO15315 384 aa19.09■□□□□ 0.65
CHTOP-204ENST00000368694 VEGFDO43915 354 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms