RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GMNNO75496 209 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 STC2O76061 302 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 HPRP00739 348 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ALBP02768 609 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 HOXB6P17509 224 aaKnown RBP14.09□□□□□ -0.15
CD48-201ENST00000368045 DCKP27707 260 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 RGS4P49798 205 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 HLCSP50747 726 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 EMP3P54852 163 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 GTF2H2Q13888 395 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 NR6A1Q15406 480 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 GTF2H2CQ6P1K8 395 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 IL27RAQ6UWB1 636 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 SAPCD2Q86UD0 394 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 GLT1D1Q96MS3 346 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 OSBPL6Q9BZF3 934 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 TRIM8Q9BZR9 551 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 GORASP2Q9H8Y8 452 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 CXorf21Q9HAI6 301 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 SLAMF8Q9P0V8 285 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ZNHIT2Q9UHR6 403 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 ASB1Q9Y576 335 aa14.09□□□□□ -0.15
CD48-201ENST00000368045 OR7A17O14581 309 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 HOXA2O43364 376 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 COCHO43405 550 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 GJB5O95377 273 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 G6PDP11413 515 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 ZNF7P17097 686 aaPredicted RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 GGT1P19440 569 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 HMOX2P30519 316 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 ALDH3A2P51648 485 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 LYPLAL1Q5VWZ2 237 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 CXorf57Q6NSI4 855 aaKnown RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 SBSNQ6UWP8 590 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 FAM126BQ8IXS8 530 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 GLB1L3Q8NCI6 653 aaPredicted RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 OR4F6Q8NGB9 312 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 OR52E4Q8NGH9 312 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 MAGEE2Q8TD90 523 aaPredicted RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 C12orf43Q96C57 262 aaKnown RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 VPS50Q96JG6 964 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 RNF145Q96MT1 663 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 UGT2B28Q9BY64 529 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 MRPL9Q9BYD2 267 aaKnown RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 PLGRKTQ9HBL7 147 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 BPIFA1Q9NP55 256 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 SARS2Q9NP81 518 aaKnown RBP14.08□□□□□ -0.16
CD48-201ENST00000368045 ASIC5Q9NY37 505 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 LHX3Q9UBR4 397 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 OARD1Q9Y530 152 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 BPTFQ12830 3046 aa14.08□□□□□ -0.16
CD48-201ENST00000368045 TRIM64BA6NI03 449 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 SLC28A1O00337 649 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 FFAR2O15552 330 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 RGS14O43566 566 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 WDR47O94967 919 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 KCNH1O95259 989 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 LATS1O95835 1130 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 KLKB1P03952 638 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 HMGCLP35914 325 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 TM4SF4P48230 202 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 HTR6P50406 440 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 AP1S1P61966 158 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 ARF5P84085 180 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 CHRNB3Q05901 458 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 EPS8Q12929 822 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 TRAF3Q13114 568 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 DAG1Q14118 895 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 AP5B1Q2VPB7 878 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
CD48-201ENST00000368045 SLC8B1Q6J4K2 584 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 MILR1Q7Z6M3 343 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
CD48-201ENST00000368045 DTWD1Q8N5C7 304 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 SLC43A3Q8NBI5 491 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 DNAJB8Q8NHS0 232 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 ITFG1Q8TB96 612 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 UBTD2Q8WUN7 234 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 PPP1R14BQ96C90 147 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 SMIM14Q96QK8 99 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 SEPHS2Q99611 448 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 SH3GL1Q99961 368 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 TSEN34Q9BSV6 310 aaKnown RBP14.07□□□□□ -0.16
CD48-201ENST00000368045 FAM126AQ9BYI3 521 aaPredicted RBP14.07□□□□□ -0.16
CD48-201ENST00000368045 GPR63Q9BZJ6 419 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 CLPBQ9H078 707 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 TRPM5Q9NZQ8 1165 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 GNPTGQ9UJJ9 305 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 STOML2Q9UJZ1 356 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 EIF3LQ9Y262 564 aaKnown RBP14.07□□□□□ -0.16
CD48-201ENST00000368045 PCDHGA11Q9Y5H2 935 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 GBF1Q92538 1859 aa14.07□□□□□ -0.16
CD48-201ENST00000368045 TMEM88BA6NKF7 163 aa14.06□□□□□ -0.16
CD48-201ENST00000368045 SEC24DO94855 1032 aaPredicted RBP14.06□□□□□ -0.16
CD48-201ENST00000368045 SNAP29O95721 258 aa14.06□□□□□ -0.16
CD48-201ENST00000368045 CD160O95971 181 aa14.06□□□□□ -0.16
CD48-201ENST00000368045 JUNBP17275 347 aaPredicted RBP14.06□□□□□ -0.16
CD48-201ENST00000368045 AKT1P31749 480 aa14.06□□□□□ -0.16
CD48-201ENST00000368045 SGSHP51688 502 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms