RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CAPGP40121 348 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ARL4DP49703 201 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 STC1P52823 247 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 TRAF7Q6Q0C0 670 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 MAMDC4Q6UXC1 1216 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ZNF280BQ86YH2 543 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 FAM81AQ8TBF8 368 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CXorf40AQ8TE69 158 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CENPIQ92674 756 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 TIFAQ96CG3 184 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 THG1LQ9NWX6 298 aaKnown RBP16.13■□□□□ 0.17
SCAF1-201ENST00000360565 ZNF510Q9Y2H8 683 aa16.13■□□□□ 0.17
SCAF1-201ENST00000360565 CNTRLQ7Z7A1 2325 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 EFCAB10A6NFE3 127 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 ANKRD66B4E2M5 251 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 BCKDKO14874 412 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 ERAL1O75616 437 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 SCELO95171 688 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 ITGA2P17301 1181 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 PPIBP23284 216 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 DNAJB1P25685 340 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 RPS14P62263 151 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 PPP1R8Q12972 351 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 ANXA8L1Q5VT79 327 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 C10orf53Q8N6V4 93 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 OR10T2Q8NGX3 314 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 EEF1AKMT1Q8WVE0 214 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 POP5Q969H6 163 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 PPP1R16AQ96I34 528 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 NSMCE3Q96MG7 304 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 EBPLQ9BY08 206 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 ENTPD4Q9Y227 616 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 CAPN15O75808 1086 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 ANGPTL1O95841 491 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 RPL3P39023 403 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 NSG1P42857 185 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 RABL3Q5HYI8 236 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 C2orf73Q8N5S3 287 aaPredicted RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 MRGPRX2Q96LB1 330 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 TIMMDC1Q9NPL8 285 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 GALNT8Q9NY28 637 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 SH3GLB1Q9Y371 365 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 MYH9P35579 1960 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 CNMDO75829 334 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 GLUD1P00367 558 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 CXCR2P25025 360 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 SULT2A1Q06520 285 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 SCAPQ12770 1279 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 R3HCC1LQ7Z5L2 792 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 HID1Q8IV36 788 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 CYP4Z2PQ8N1L4 340 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 PSMA8Q8TAA3 256 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 FANCEQ9HB96 536 aa16.12■□□□□ 0.17
SCAF1-201ENST00000360565 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
SCAF1-201ENST00000360565 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 H0Y858 1186 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 K7EPI3 171 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CXCR6O00574 342 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 FAM189A1O60320 539 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 ANXA4P09525 319 aaPredicted RBP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CTNNB1P35222 781 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CSKP41240 450 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 LDLRAP1Q5SW96 308 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CAPN13Q6MZZ7 669 aaPredicted RBP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 DEPDC4Q8N2C3 294 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 MYDGFQ969H8 173 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 OGDHLQ9ULD0 1010 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 DGKBQ9Y6T7 804 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 A0A0D9SEW6 157 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 PAPSS2O95340 614 aaPredicted RBP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 NR2F1P10589 423 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CDK9P50750 372 aaKnown RBP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 SERINC3Q13530 473 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CCNYL2Q5T2Q4 361 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 TRNP1Q6NT89 227 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 OR4A15Q8NGL6 344 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 TMEM74Q96NL1 305 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 CCNB1IP1Q9NPC3 277 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 TMEM248Q9NWD8 314 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 VPS51Q9UID3 782 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 LCHNA4D1U4 455 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 OR10H3O60404 316 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 MAFKO60675 156 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 SLC26A3P40879 764 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 UFM1P61960 85 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 BORCS5Q969J3 196 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 UTP4Q969X6 686 aaKnown RBP16.11■□□□□ 0.17
SCAF1-201ENST00000360565 KIAA1191Q96A73 305 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 AP2M1Q96CW1 435 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 DHRS4Q9BTZ2 278 aa16.11■□□□□ 0.17
SCAF1-201ENST00000360565 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.11■□□□□ 0.178e-16■■■■□ 25.7
SCAF1-201ENST00000360565 ZCWPW2A0A1B0GU75 182 aa16.1■□□□□ 0.17
SCAF1-201ENST00000360565 NOBOXO60393 691 aa16.1■□□□□ 0.17
SCAF1-201ENST00000360565 POP4O95707 220 aaKnown RBP16.1■□□□□ 0.17
SCAF1-201ENST00000360565 ZNF678Q5SXM1 525 aa16.1■□□□□ 0.17
SCAF1-201ENST00000360565 RSBN1Q5VWQ0 802 aaPredicted RBP16.1■□□□□ 0.17
SCAF1-201ENST00000360565 KCTD8Q6ZWB6 473 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms