RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 LNX1Q8TBB1 728 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 RUFY2Q8WXA3 655 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ELMO3Q96BJ8 720 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SCNM1Q9BWG6 230 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 C1QTNF3Q9BXJ4 246 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ADGRE3Q9BY15 652 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KRTAP9-8Q9BYQ0 159 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CHRNA10Q9GZZ6 450 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GOLPH3LQ9H4A5 285 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 COPS7BQ9H9Q2 264 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PLK2Q9NYY3 685 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 EHD3Q9NZN3 535 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 LRRC42Q9Y546 428 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCDHAC2Q9Y5I4 1007 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CSMD1Q96PZ7 3565 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 M0R082 166 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 LATS1O95835 1130 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CD48P09326 243 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 BRAFP15056 766 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ADRA1DP25100 572 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ECHS1P30084 290 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TXKP42681 527 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MAGEA11P43364 429 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC15A1P46059 708 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SOX2P48431 317 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 DIO1P49895 249 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CLCN7P51798 805 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCNHP51946 323 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 HMGCS2P54868 508 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 YWHAZP63104 245 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ARHGAP1Q07960 439 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KIF5AQ12840 1032 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SPP2Q13103 211 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KEAP1Q14145 624 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 FGFBP1Q14512 234 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 NHSL2Q5HYW2 709 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 BTBD8Q5XKL5 378 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLFN13Q68D06 897 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CAPRIN2Q6IMN6 1127 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TTI2Q6NXR4 508 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 FAM159AQ6UWV7 190 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TREML4Q6UXN2 200 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC22A16Q86VW1 577 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 KRTAP1-3Q8IUG1 177 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 APCDD1Q8J025 514 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF276Q8N554 614 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF417Q8TAU3 575 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 SMCR8Q8TEV9 937 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 NEU4Q8WWR8 484 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GBP4Q96PP9 640 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF587Q96SQ5 575 aaPredicted RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 UPF2Q9HAU5 1272 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 GMPR2Q9P2T1 348 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TDRKHQ9Y2W6 561 aaKnown RBP1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 USP16Q9Y5T5 823 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 CUBNO60494 3623 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 MAP3K15Q6ZN16 1313 aa1.83□□□□□ -2.12
SMARCAD1-202ENST00000359052 TARSL2A2RTX5 802 aaKnown RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 FCHO1O14526 889 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PRYO14603 147 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 CHRM4P08173 479 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 UQCRC1P31930 480 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 CDAP32320 146 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PTPN7P35236 360 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 RORAP35398 523 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 TRIM23P36406 574 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCNJ3P48549 501 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 STAT5BP51692 787 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 MAPK10P53779 464 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 UFM1P61960 85 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 XRCC4Q13426 336 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 TMED1Q13445 227 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 MAMLD1Q13495 774 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 KCNAB1Q14722 419 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 NOMO1Q15155 1222 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 NTRK2Q16620 822 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PROSER3Q2NL68 480 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PLK5Q496M5 336 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 LRRC24Q50LG9 513 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SERPINA13PQ6UXR4 307 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 MTSS1LQ765P7 747 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 ARHGAP22Q7Z5H3 698 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SUPT20HQ8NEM7 779 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF668Q96K58 619 aaPredicted RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF641Q96N77 438 aaPredicted RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 ANKRD60Q9BZ19 345 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 C11orf54Q9H0W9 315 aaPredicted RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCDHB16Q9NRJ7 776 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 CLDND1Q9NY35 253 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 RABL2AQ9UBK7 228 aaPredicted RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SH3BGRL2Q9UJC5 107 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 TRPC5Q9UL62 973 aaPredicted RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SLC5A6Q9Y289 635 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 OR5K3A6NET4 321 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 CYTH3O43739 400 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 SEC31AO94979 1220 aaKnown RBP1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCDH8O95206 1070 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 CBX6O95503 412 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 CD3EP07766 207 aa1.82□□□□□ -2.12
SMARCAD1-202ENST00000359052 GNAI3P08754 354 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms