RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EML5Q05BV3 1969 aa17.85■□□□□ 0.45
SMARCD3-202ENST00000356800 NEMP2A6NFY4 417 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 LATO43561 262 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 VEGFDO43915 354 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 TRIM13O60858 407 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 APBB3O95704 486 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 PDGFBP01127 241 aaPredicted RBP17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 FTH1P02794 183 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 PXNP49023 591 aaPredicted RBP17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 TSNQ15631 228 aaKnown RBP17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 ZNF658BQ4V348 819 aaPredicted RBP17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 CYHR1Q6ZMK1 362 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 ZCCHC23Q6ZST2 131 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 ZNF547Q8IVP9 402 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 FAM160A2Q8N612 972 aaPredicted RBP17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 CCDC197Q8NCU1 140 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 RHEBL1Q8TAI7 183 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 RLN3Q8WXF3 142 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 WDR26Q9H7D7 661 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 EBF2Q9HAK2 575 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 GULP1Q9UBP9 304 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 CDYLQ9Y232 598 aa17.84■□□□□ 0.45
SMARCD3-202ENST00000356800 CCDC189A1A4V9 331 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 QSOX1O00391 747 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 BTN3A1O00481 513 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 IGHV4-34P06331 123 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 DGKAP23743 735 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 LIPMQ5VYY2 423 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 CWF19L1Q69YN2 538 aaKnown RBP17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 DOK6Q6PKX4 331 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 VRK3Q8IV63 474 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 ANKS4BQ8N8V4 417 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 ELMO1Q92556 727 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 CCM2Q9BSQ5 444 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 DLGAP2Q9P1A6 1054 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 CA5BQ9Y2D0 317 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 PLXND1Q9Y4D7 1925 aa17.83■□□□□ 0.45
SMARCD3-202ENST00000356800 IGHV1OR15-9A0A0B4J2B8 117 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 EBAG9O00559 213 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 GPC4O75487 556 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 MTHFD2P13995 350 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 ATP5F1P24539 256 aaPredicted RBP17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 CD6P30203 668 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 OXTRP30559 389 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 RGS4P49798 205 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 CLDN2P57739 230 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 BOP1Q14137 746 aaKnown RBP17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 TTLL9Q3SXZ7 439 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 FOXR1Q6PIV2 292 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 XKR5Q6UX68 686 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 TRAPPC5Q8IUR0 188 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 FOXJ1Q92949 421 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 CCDC126Q96EE4 140 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 KLHL14Q9P2G3 628 aa17.83■□□□□ 0.44
SMARCD3-202ENST00000356800 TECTAO75443 2155 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 POM121BA6NF01 834 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 ERICH4A6NGS2 130 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 A8MT66 165 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 F8W8V4 182 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 CHUKO15111 745 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 PI15O43692 258 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 KERAO60938 352 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 ZNF217O75362 1048 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 CBSLP0DN79 551 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 MYCLP1P12525 358 aaPredicted RBP17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 CBSP35520 551 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 DNAJB13P59910 316 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 SIGLEC14Q08ET2 396 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 HSPA14Q0VDF9 509 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 ASPHQ12797 758 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 GTF2H3Q13889 308 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 PLEKHS1Q5SXH7 462 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 KIAA0895LQ68EN5 471 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 CRTC3Q6UUV7 619 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 C11orf96Q7Z7L8 435 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 LILRA3Q8N6C8 439 aaPredicted RBP17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 DENND6BQ8NEG7 585 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 STAG3L4Q8TBR4 150 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 MOCOSQ96EN8 888 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 APOOQ9BUR5 198 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 GPR174Q9BXC1 333 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 C20orf27Q9GZN8 174 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 ZNF395Q9H8N7 513 aaPredicted RBP17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 PHPT1Q9NRX4 125 aaPredicted RBP17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 PRKAB1Q9Y478 270 aa17.82■□□□□ 0.44
SMARCD3-202ENST00000356800 TMEM114B3SHH9 223 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 K7ESF4 209 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 UBXN8O00124 270 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 KPNA5O15131 536 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 NUAK1O60285 661 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 FUCA1P04066 466 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 TROVE2P10155 538 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 HNRNPA2B1P22626 353 aaKnown RBP17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 PBLDP30039 288 aaPredicted RBP17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 ARRB2P32121 409 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 SLC1A6P48664 564 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 CCR5P51681 352 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 HK3P52790 923 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 SBSNQ6UWP8 590 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms