RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 RPS6KA2Q15349 733 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 NPTX1Q15818 432 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 UNC50Q53HI1 259 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 YIF1BQ5BJH7 314 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 PAGE3Q5JUK9 113 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 SNAP47Q5SQN1 464 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 PM20D1Q6GTS8 502 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 NEK5Q6P3R8 708 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 VN1R5Q7Z5H4 357 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 SPATA19Q7Z5L4 167 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 REM2Q8IYK8 340 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC22A15Q8IZD6 547 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC38A6Q8IZM9 456 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TMEM199Q8N511 208 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 AADATQ8N5Z0 425 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ITFG1Q8TB96 612 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TWIST2Q8WVJ9 160 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ST6GAL2Q96JF0 529 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 APOL2Q9BQE5 337 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TRIM62Q9BVG3 475 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 DCSTAMPQ9H295 470 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 CHST12Q9NRB3 414 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 COMMD8Q9NX08 183 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ADPRHL2Q9NX46 363 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ITM2BQ9Y287 266 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 C9JVG2 144 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM72CH0Y354 149 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 NFKBIEO00221 500 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PRMT5O14744 637 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PIP5K1BO14986 540 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 XPNPEP2O43895 674 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 KPNA6O60684 536 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 JCHAINP01591 159 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PGK2P07205 417 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HOXB8P17481 243 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PSMB9P28065 219 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GTF2E2P29084 291 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ARL1P40616 181 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 MAP2K4P45985 399 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CXCR3P49682 368 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FCGRTP55899 365 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HERVK_113P63132 956 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 SH3BP2P78314 561 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PITX1P78337 314 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TSPY1Q01534 308 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TYSND1Q2T9J0 566 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FUT11Q495W5 492 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 RAB41Q5JT25 222 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM72AQ5TYM5 149 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 KIAA0319Q5VV43 1072 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 SYPL2Q5VXT5 272 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 KANK2Q63ZY3 851 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM72DQ6L9T8 149 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CES5AQ6NT32 575 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CLEC20AQ6ZU45 233 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM72BQ86X60 149 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GRAMD2AQ8IUY3 354 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CCDC28AQ8IWP9 274 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TP53INP2Q8IXH6 220 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ELMOD2Q8IZ81 293 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PARP16Q8N5Y8 322 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 NPWQ8N729 165 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 SETD9Q8NE22 299 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 JPH3Q8WXH2 748 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TMEM74Q96NL1 305 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 LPIN3Q9BQK8 851 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 C16orf70Q9BSU1 422 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ERVK-6Q9BXR3 956 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 UGT2B28Q9BY64 529 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 RUBCNLQ9H714 662 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CCNB1IP1Q9NPC3 277 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ACOT13Q9NPJ3 140 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TREX1Q9NSU2 369 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TMEM45AQ9NWC5 275 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 POLG2Q9UHN1 485 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 USP22Q9UPT9 525 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CSADQ9Y600 493 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HSPE1-MOB4S4R3N1 261 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 SHROOM3Q8TF72 1996 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 SMIM28A0A1B0GU29 152 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GABRDO14764 452 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 BCKDKO14874 412 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 RECQL4O94761 1208 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 C1RP00736 705 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 MYCP01106 439 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CYP11A1P05108 521 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 PRR35P0CG20 571 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 HGFP14210 728 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GGT1P19440 569 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 FSHRP23945 695 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ADRA1AP35348 466 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 ETV6P41212 452 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 MFSD10Q14728 455 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 GRIK4Q16099 956 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 CDONQ4KMG0 1287 aa10.19□□□□□ -0.78
CHRNA1-202ENST00000348749 TPRG1LQ5T0D9 272 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms