RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 DGKEP52429 567 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 OCRLQ01968 901 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PFKFB4Q16877 469 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 WSCD2Q2TBF2 565 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 TRAPPC5Q8IUR0 188 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PLA2G15Q8NCC3 412 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 SLC17A9Q9BYT1 436 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 TRIM39Q9HCM9 518 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CD248Q9HCU0 757 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 ACSS2Q9NR19 701 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CD274Q9NZQ7 290 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 KLHL42Q9P2K6 505 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 MARCOQ9UEW3 520 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CNOT6Q9ULM6 557 aaKnown RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PABPN1LA6NDY0 278 aaKnown RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 FAM170BA6NMN3 283 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 ITM2AO43736 263 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 GABRG2P18507 467 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 AOAHP28039 575 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 PBLDP30039 288 aaPredicted RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 DNAJB13P59910 316 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 CES4AQ5XG92 561 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 DOK6Q6PKX4 331 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 ADAMTSL2Q86TH1 951 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 HORMAD1Q86X24 394 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 FBXO39Q8N4B4 442 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 TMEM105Q8N8V8 129 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 PDLIM5Q96HC4 596 aaKnown RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 BTBD1Q9H0C5 482 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 UTP6Q9NYH9 597 aaKnown RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 MBD1Q9UIS9 605 aaPredicted RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 DCTN4Q9UJW0 460 aa17.06■□□□□ 0.32
CLDN4-201ENST00000340958 ZFR2Q9UPR6 939 aaKnown RBP17.06■□□□□ 0.32
CLDN4-201ENST00000340958 KANSL1LA0AUZ9 987 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 CCDC189A1A4V9 331 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ENO3P13929 434 aaPredicted RBP17.05■□□□□ 0.32
CLDN4-201ENST00000340958 AOC1P19801 751 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 TPMTP51580 245 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 CTSCP53634 463 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 RCN2Q14257 317 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 INPP5AQ14642 412 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 CGB2Q6NT52 195 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 PTGR2Q8N8N7 351 aaPredicted RBP17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ASZ1Q8WWH4 475 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 FUBP1Q96AE4 644 aaKnown RBP17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ATOH8Q96SQ7 321 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 CCM2Q9BSQ5 444 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 IKZF3Q9UKT9 509 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 DNAJC16Q9Y2G8 782 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ARL2BPQ9Y2Y0 163 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 PLXNB3Q9ULL4 1909 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 A0A0G2JND7 137 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 LRRC72A6NJI9 287 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 TGDSO95455 350 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 IRF4Q15306 451 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 PLEKHS1Q5SXH7 462 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ANO7Q6IWH7 933 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 NEK5Q6P3R8 708 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ADGRG6Q86SQ4 1221 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 WDR75Q8IWA0 830 aaKnown RBP17.05■□□□□ 0.32
CLDN4-201ENST00000340958 TSTD1Q8NFU3 115 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 PJA1Q8NG27 643 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 MOCOSQ96EN8 888 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 C1QTNF2Q9BXJ5 285 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 C20orf27Q9GZN8 174 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 WDR26Q9H7D7 661 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 EML4Q9HC35 981 aaKnown RBP17.05■□□□□ 0.32
CLDN4-201ENST00000340958 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 TMEM98Q9Y2Y6 226 aa17.05■□□□□ 0.32
CLDN4-201ENST00000340958 RAD51BO15315 384 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 SLC31A1O15431 190 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 VEGFDO43915 354 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 SUPT7LO94864 414 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 IMPDH1P20839 514 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 AVPR2P30518 371 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 PRLHRP49683 370 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 CDK3Q00526 305 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 CRTC3Q6UUV7 619 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 SYT13Q7L8C5 426 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 PIWIL2Q8TC59 973 aaKnown RBP17.04■□□□□ 0.32
CLDN4-201ENST00000340958 AGR3Q8TD06 166 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 FAM131CQ96AQ9 280 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 ZNF514Q96K75 400 aaPredicted RBP17.04■□□□□ 0.32
CLDN4-201ENST00000340958 CNDP1Q96KN2 507 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 TMEM237Q96Q45 408 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 NELL2Q99435 816 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 PLCD4Q9BRC7 762 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 DRC3Q9H069 523 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
CLDN4-201ENST00000340958 KDM4CQ9H3R0 1056 aa17.04■□□□□ 0.32
CLDN4-201ENST00000340958 MBNL1Q9NR56 388 aaKnown RBP17.04■□□□□ 0.32
CLDN4-201ENST00000340958 PHPT1Q9NRX4 125 aaPredicted RBP17.04■□□□□ 0.32
CLDN4-201ENST00000340958 TMCO1Q9UM00 188 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms