RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MID1IP1Q9NPA3 183 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.55■□□□□ 0.4
RAB39A-201ENST00000320578 CACNA2D2Q9NY47 1150 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 TAS2R1Q9NYW7 299 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 FADS3Q9Y5Q0 445 aa17.55■□□□□ 0.4
RAB39A-201ENST00000320578 E2F3O00716 465 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 MGRN1O60291 552 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 RNASEH1O60930 286 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ESRRBO95718 433 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ADH1BP00325 375 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 JUNP05412 331 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 KRT16P08779 473 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 P2RY2P41231 377 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 KIR2DL1P43626 348 aaPredicted RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 KLF10Q13118 480 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 RIPK1Q13546 671 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 NAA25Q14CX7 972 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 PHYKPLQ8IUZ5 450 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 RASGRP3Q8IV61 690 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 TEX9Q8N6V9 391 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 MMADHCQ9H3L0 296 aaPredicted RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ITM2BQ9Y287 266 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 LRRC14BA6NHZ5 514 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 K7EQS6 105 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 GYG2O15488 501 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 GPC4O75487 556 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 RECQL5O94762 991 aaPredicted RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 GSTM1P09488 218 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 C6P13671 934 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 PRLHRP49683 370 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 GSTM4Q03013 218 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 HERC3Q15034 1050 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 LRIT3Q3SXY7 679 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 CYB5D1Q6P9G0 228 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 PELI3Q8N2H9 469 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ZNF513Q8N8E2 541 aaPredicted RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ASZ1Q8WWH4 475 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 UTP4Q969X6 686 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 NUS1Q96E22 293 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 NSUN5Q96P11 429 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 HGH1Q9BTY7 390 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 WRAP53Q9BUR4 548 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 SLC12A9Q9BXP2 914 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ZCCHC2Q9C0B9 1178 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 ZBTB26Q9HCK0 441 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 FBRSL1Q9HCM7 1045 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 PFDN4Q9NQP4 134 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 CD207Q9UJ71 328 aa17.54■□□□□ 0.4
RAB39A-201ENST00000320578 CNOT6Q9ULM6 557 aaKnown RBP17.54■□□□□ 0.4
RAB39A-201ENST00000320578 NEMP1O14524 444 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 DCXO43602 365 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 TSPAN6O43657 245 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 VPS4BO75351 444 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 SLCO2B1O94956 709 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 C5AR1P21730 350 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 MAPK9P45984 424 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 PSMD8P48556 350 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 AGTR2P50052 363 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 AGERQ15109 404 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 DNAL1Q4LDG9 190 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 PIP5KL1Q5T9C9 394 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 TCAIMQ8N3R3 496 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 CXorf40AQ8TE69 158 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 ASB11Q8WXH4 323 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 ADAMTS6Q9UKP5 1117 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 DNAJC15Q9Y5T4 150 aa17.53■□□□□ 0.4
RAB39A-201ENST00000320578 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
RAB39A-201ENST00000320578 RANBP2P49792 3224 aaKnown RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 NCF1BA6NI72 391 aaPredicted RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 NCF1CA8MVU1 366 aaPredicted RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 B2RBV5 119 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 GFYI3L273 518 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 GSC2O15499 205 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 LZTS3O60299 673 aaPredicted RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 SOD1P00441 154 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 C7P10643 843 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 UROSP10746 265 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 NCF1P14598 390 aaPredicted RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 ATP4BP51164 291 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 CNTN1Q12860 1018 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 TMEM115Q12893 351 aaPredicted RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 BCL7AQ4VC05 210 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 KHDC1Q4VXA5 237 aaKnown RBP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 RINLQ6ZS11 566 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 EP400NLQ6ZTU2 488 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 LARP4Q71RC2 724 aaKnown RBP eCLIP17.52■□□□□ 0.4
RAB39A-201ENST00000320578 CHPFQ8IZ52 775 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 ARHGAP24Q8N264 748 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 RHBDF1Q96CC6 855 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 C19orf60Q96EN9 201 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 MIPEPQ99797 713 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 GABRG3Q99928 467 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 TRIM54Q9BYV2 358 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 MYO9BQ13459 2157 aa17.52■□□□□ 0.4
RAB39A-201ENST00000320578 GIPC1O14908 333 aa17.51■□□□□ 0.39
RAB39A-201ENST00000320578 ATG13O75143 517 aa17.51■□□□□ 0.39
RAB39A-201ENST00000320578 THRAP10827 490 aa17.51■□□□□ 0.39
RAB39A-201ENST00000320578 TSPAN8P19075 237 aa17.51■□□□□ 0.39
RAB39A-201ENST00000320578 DRD3P35462 400 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms