RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TET3O43151 1660 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 SPATA31A1Q5TZJ5 1347 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 ACKR2O00590 384 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 WNT10BO00744 389 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 PPM1BO75688 479 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 IDO1P14902 403 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 PRKACGP22612 351 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TGFBR2P37173 567 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 PURAQ00577 322 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 CPSF7Q8N684 471 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 FXYD6Q9H0Q3 95 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 IRAK3Q9Y616 596 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 A8MU76 341 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 GABRR2P28476 465 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 MAGEA11P43364 429 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 CBX5P45973 191 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 POLR2LP62875 67 aaKnown RBP12.51□□□□□ -0.41
USP38-201ENST00000307017 CXCL9Q07325 125 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 TRPV1Q8NER1 839 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 FAIM2Q9BWQ8 316 aa12.51□□□□□ -0.41
USP38-201ENST00000307017 SLC26A4O43511 780 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CPN2P22792 545 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 EIF4BP23588 611 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 SKP1P63208 163 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 MAP4K3Q8IVH8 894 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CD101Q93033 1021 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 DGCR14Q96DF8 476 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 MYH8P13535 1937 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 SAGE2PA6NJ88 616 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 EFCAB9A8MZ26 197 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 SOX14O95416 240 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 SLC35G4P0C7Q5 338 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 SDC2P34741 201 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 TARDBPQ13148 414 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP38-201ENST00000307017 ZMYND11Q15326 602 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 MSANTD1Q6ZTZ1 278 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 SLC22A16Q86VW1 577 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 GATAD2BQ8WXI9 593 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 KREMEN1Q96MU8 473 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 FBXO5Q9UKT4 447 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 TNPO3Q9Y5L0 923 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 CNTNAP1P78357 1384 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 NEMP2A6NFY4 417 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CACNB4O00305 520 aaPredicted RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 XKRYO14609 159 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 AKAP8O43823 692 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 ZNF8P17098 575 aaPredicted RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 ITGA2P17301 1181 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 ACSL1P33121 698 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 PBX3P40426 434 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 RGS19P49795 217 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 TYSND1Q2T9J0 566 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 KLHL26Q53HC5 615 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 ALG1LQ6GMV1 187 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CHST15Q7LFX5 561 aaPredicted RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 TRIM74Q86UV6 250 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 TRIM73Q86UV7 250 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 MAGEC3Q8TD91 643 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 RNF208Q9H0X6 261 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CDT1Q9H211 546 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 PORCNQ9H237 461 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 IPPKQ9H8X2 491 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CFAP97Q9P2B7 532 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 GRIN2DO15399 1336 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 PTPRJQ12913 1337 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 UPK3BL1B0FP48 263 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 UPK3BL2E5RIL1 263 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 KLRC4O43908 158 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 ATP5BP06576 529 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 C2P06681 752 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 RXRGP48443 463 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 NKX2-5P52952 324 aaPredicted RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 CADM1Q9BY67 442 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 CST11Q9H112 138 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 PLEKHA1Q9HB21 404 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 PCDH18Q9HCL0 1135 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 ST3GAL5Q9UNP4 418 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 MADDQ8WXG6 1647 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 RIMS1Q86UR5 1692 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 UGT2B11O75310 529 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 CYP3A5P20815 502 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 GCNT1Q02742 428 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 FAPQ12884 760 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 TMED4Q7Z7H5 227 aa12.5□□□□□ -0.41
USP38-201ENST00000307017 PNO1Q9NRX1 252 aaKnown RBP12.5□□□□□ -0.41
USP38-201ENST00000307017 CLUHO75153 1309 aa12.49□□□□□ -0.41
USP38-201ENST00000307017 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms