RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SLC9B2Q86UD5 537 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 CACTIN-AS1Q8N1I8 211 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 CALML6Q8TD86 181 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 CCDC3Q9BQI4 270 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 L2HGDHQ9H9P8 463 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 PLAC1Q9HBJ0 212 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 C20orf96Q9NUD7 363 aaPredicted RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 ZC3H7BQ9UGR2 993 aaKnown RBP26.39■■□□□ 1.82
SSU72-201ENST00000291386 WASF3Q9UPY6 502 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 CHMP2BQ9UQN3 213 aa26.39■■□□□ 1.82
SSU72-201ENST00000291386 PTPRBP23467 1997 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 PDZK1P1A8MUH7 402 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 OPA1O60313 960 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 RPL10P27635 214 aaKnown RBP26.38■■□□□ 1.81
SSU72-201ENST00000291386 PBLDP30039 288 aaPredicted RBP26.38■■□□□ 1.81
SSU72-201ENST00000291386 PLTPP55058 493 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 TRADDQ15628 312 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 CCDC157Q569K6 752 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 UNC5AQ6ZN44 842 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 OTUD6BQ8N6M0 293 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 WDR48Q8TAF3 677 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 FBXO25Q8TCJ0 367 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 CARD6Q9BX69 1037 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 FOXP3Q9BZS1 431 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 INTS10Q9NVR2 710 aaKnown RBP26.38■■□□□ 1.81
SSU72-201ENST00000291386 IL1RAPL1Q9NZN1 696 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 RABGEF1Q9UJ41 708 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 VPS9D1Q9Y2B5 631 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 WDR37Q9Y2I8 494 aa26.38■■□□□ 1.81
SSU72-201ENST00000291386 PPM1DO15297 605 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 GPR3P46089 330 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 UBE2IP63279 158 aaKnown RBP26.37■■□□□ 1.81
SSU72-201ENST00000291386 INSM1Q01101 510 aaPredicted RBP26.37■■□□□ 1.81
SSU72-201ENST00000291386 RPA4Q13156 261 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 TMPRSS7Q7RTY8 843 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 KCNMB4Q86W47 210 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 TMPRSS12Q86WS5 348 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 CFAP206Q8IYR0 622 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 LPGAT1Q92604 370 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 FAM167BQ9BTA0 163 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 FAM129AQ9BZQ8 928 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 STN1Q9H668 368 aaKnown RBP26.37■■□□□ 1.81
SSU72-201ENST00000291386 COG4Q9H9E3 785 aa26.37■■□□□ 1.81
SSU72-201ENST00000291386 ZNF624Q9P2J8 865 aaPredicted RBP26.37■■□□□ 1.81
SSU72-201ENST00000291386 TRBV23OR9-2A0A075B6M9 112 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 RHPN2P1A8MT19 583 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 SLC19A1P41440 591 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 HALP42357 657 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 HHEXQ03014 270 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 CLCA4Q14CN2 919 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 SEPT7Q16181 437 aaKnown RBP26.36■■□□□ 1.81
SSU72-201ENST00000291386 CDCP2Q5VXM1 449 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 ZNF470Q6ECI4 717 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 GALNT15Q8N3T1 639 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 CHCHD4Q8N4Q1 142 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 FBXO36Q8NEA4 188 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 GABPB2Q8TAK5 448 aaPredicted RBP26.36■■□□□ 1.81
SSU72-201ENST00000291386 SH3KBP1Q96B97 665 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 TSSK1BQ9BXA7 367 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 UCK1Q9HA47 277 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 FAM114A2Q9NRY5 505 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 POT1Q9NUX5 634 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 CPNE7Q9UBL6 633 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 DMGDHQ9UI17 866 aaKnown RBP26.36■■□□□ 1.81
SSU72-201ENST00000291386 GNPTGQ9UJJ9 305 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 PCDHB1Q9Y5F3 818 aa26.36■■□□□ 1.81
SSU72-201ENST00000291386 COL27A1Q8IZC6 1860 aaPredicted RBP26.36■■□□□ 1.81
SSU72-201ENST00000291386 MED19A0JLT2 244 aaPredicted RBP26.35■■□□□ 1.81
SSU72-201ENST00000291386 FAM221BA6H8Z2 402 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 NTN3O00634 580 aaPredicted RBP26.35■■□□□ 1.81
SSU72-201ENST00000291386 LIN7AO14910 233 aaPredicted RBP26.35■■□□□ 1.81
SSU72-201ENST00000291386 ZW10O43264 779 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 S1PR4O95977 384 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 PLOD1Q02809 727 aaPredicted RBP26.35■■□□□ 1.81
SSU72-201ENST00000291386 GUCY2DQ02846 1103 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 FOXC1Q12948 553 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 HP1BP3Q5SSJ5 553 aaPredicted RBP26.35■■□□□ 1.81
SSU72-201ENST00000291386 SPRED1Q7Z699 444 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 CNTN4Q8IWV2 1026 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 ZBED8Q8IZ13 594 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 CERS2Q96G23 380 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 BIRC8Q96P09 236 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 ABCG4Q9H172 646 aa26.35■■□□□ 1.81
SSU72-201ENST00000291386 ESYT3A0FGR9 886 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 ESPNB1AK53 854 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 TCEA3O75764 348 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 SLC1A2P43004 574 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 BIRC2Q13490 618 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 FASTKD3Q14CZ7 662 aaKnown RBP26.34■■□□□ 1.81
SSU72-201ENST00000291386 HSP90AA5PQ58FG0 334 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 CAPRIN2Q6IMN6 1127 aaKnown RBP26.34■■□□□ 1.81
SSU72-201ENST00000291386 ANKMY2Q8IV38 441 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 DENND6AQ8IWF6 608 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 RBM12BQ8IXT5 1001 aaKnown RBP26.34■■□□□ 1.81
SSU72-201ENST00000291386 UNC5BQ8IZJ1 945 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 LILRA3Q8N6C8 439 aaPredicted RBP26.34■■□□□ 1.81
SSU72-201ENST00000291386 PANX3Q96QZ0 392 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.34■■□□□ 1.81
SSU72-201ENST00000291386 EPB41L5Q9HCM4 733 aa26.34■■□□□ 1.81
SSU72-201ENST00000291386 ZDHHC18Q9NUE0 388 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms