RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CACNA2D3Q8IZS8 1091 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 KCNJ9Q92806 393 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 GLYATL1Q969I3 302 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 HIC2Q96JB3 615 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF514Q96K75 400 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 AARSD1Q9BTE6 412 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC17A9Q9BYT1 436 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 CD274Q9NZQ7 290 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 GMEB2Q9UKD1 530 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 MKL2Q9ULH7 1088 aa8.32□□□□□ -1.08
PTPDC1-201ENST00000288976 SUPT3HB4E1H0 165 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 MAGEC1O60732 1142 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 TRIM23P36406 574 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 RGS4P49798 205 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC18A2Q05940 514 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PTPRCAPQ14761 206 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PTPRRQ15256 657 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 INSCQ1MX18 579 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 LRRC73Q5JTD7 316 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 TRAPPC5Q8IUR0 188 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 NELL1Q92832 810 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 LINC00615Q96LM1 132 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HHIPQ96QV1 700 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GPR27Q9NS67 375 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SMG5Q9UPR3 1016 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PSAT1Q9Y617 370 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 LRP4O75096 1905 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 A0A1W2PQU0 124 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 FADS2P1A8MWK0 482 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HNRNPCL2B2RXH8 293 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 KPNA5O15131 536 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HNRNPCL1O60812 293 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 KCNJ13O60928 360 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 CBSLP0DN79 551 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 MYCLP1P12525 358 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 EEF1B2P24534 225 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GABRB3P28472 473 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 CBSP35520 551 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SKIV2L2P42285 1042 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 YPEL5P62699 121 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GNGT1P63211 74 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 MPP1Q00013 466 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 IRF4Q15306 451 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 Q6ZVL8 140 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 DENND6AQ8IWF6 608 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SCARF2Q96GP6 870 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 BIRC8Q96P09 236 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 COPS8Q99627 209 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GTPBP2Q9BX10 602 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC6A17Q9H1V8 727 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 DCTN4Q9UJW0 460 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GPR34Q9UPC5 381 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 IGLON5A6NGN9 336 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PRMT5O14744 637 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 AKT2P31751 481 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 CNR2P34972 360 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SOAT1P35610 550 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 DPP6P42658 865 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 ATP13A5Q4VNC0 1218 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 TTMPQ5BVD1 217 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 KYAT3Q6YP21 454 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SH2D5Q6ZV89 423 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 IQCHQ86VS3 1027 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 MAGED4Q96JG8 741 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 UNKQ9C0B0 810 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 COPS7BQ9H9Q2 264 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 CNOT6Q9ULM6 557 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 NOTCH3Q9UM47 2321 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 OR51F1A6NGY5 319 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PRAMEF26H0Y7S4 382 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 BUD23O43709 281 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A9O60656 530 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 RHOBTB1O94844 696 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HAUS5O94927 633 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 OR56A5P0C7T3 313 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HNRNPA2B1P22626 353 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GPC1P35052 558 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HNF4AP41235 474 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 GPR1P46091 355 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 RAP1GDS1P52306 607 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 RAB10P61026 200 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 DMTNQ08495 405 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 CTSL3PQ5NE16 218 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 LRRC8EQ6NSJ5 796 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 LONP2Q86WA8 852 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 DCP2Q8IU60 420 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PIANPQ8IYJ0 282 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 SYTL1Q8IYJ3 562 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PANX3Q96QZ0 392 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 KLF6Q99612 283 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 CLPBQ9H078 707 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A7Q9HAW7 530 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A10Q9HAW8 530 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A8Q9HAW9 530 aa8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 FBXO6Q9NRD1 293 aaPredicted RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 PPIEQ9UNP9 301 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 OAS3Q9Y6K5 1087 aaKnown RBP8.31□□□□□ -1.08
PTPDC1-201ENST00000288976 HMX2A2RU54 273 aa8.3□□□□□ -1.08
PTPDC1-201ENST00000288976 AXIN1O15169 862 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms