RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TTPAP49638 278 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 GPR15P49685 360 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 GSK3BP49841 420 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 GALNT3Q14435 633 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 CYP51A1Q16850 503 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SDHAF4Q5VUM1 108 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 MIB1Q86YT6 1006 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 DPP10Q8N608 796 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 GAB3Q8WWW8 586 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SUSD6Q92537 303 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 IL1RL2Q9HB29 575 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 SUN2Q9UH99 717 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ZNF639Q9UID6 485 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 ANAPC2Q9UJX6 822 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 PTGDR2Q9Y5Y4 395 aa12.76□□□□□ -0.37
C9orf3-201ENST00000277198 MIA3Q5JRA6 1907 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 TCRBV5S2A0A599 114 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 UBA6A0AVT1 1052 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 SAC3D1A6NKF1 404 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 ACOX3O15254 700 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 TBX18O95935 607 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 GNA12Q03113 381 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 TAF10Q12962 218 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 TSNQ15631 228 aaKnown RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 ABRAXAS1Q6UWZ7 409 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 TMC5Q6UXY8 1006 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 GJD3Q8N144 294 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 ZNF420Q8TAQ5 688 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 PNPT1Q8TCS8 783 aaKnown RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 OSCP1Q8WVF1 389 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 KCNA7Q96RP8 456 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 ZNF382Q96SR6 550 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 KCTD14Q9BQ13 255 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 SEMA4BQ9NPR2 832 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-201ENST00000277198 EGFL7Q9UHF1 273 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 PCTPQ9UKL6 214 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 DOCK4Q8N1I0 1966 aa12.75□□□□□ -0.37
C9orf3-201ENST00000277198 A0A1B0GTW7 788 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 LRRC14BA6NHZ5 514 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 H0YAE9 185 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 PLOD2O00469 737 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 RFPL2O75678 378 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 PKMP14618 531 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CR2P20023 1033 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 FMO4P31512 558 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 ZFP36L2P47974 494 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 POLR2JP52435 117 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 DIO3P55073 304 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CDH4P55283 916 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 EMX2Q04743 252 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 LIPEQ05469 1076 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 PRKG2Q13237 762 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CAPRIN1Q14444 709 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 PTPRCAPQ14761 206 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CTXN3Q4LDR2 81 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 AARS2Q5JTZ9 985 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 NADSYN1Q6IA69 706 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 UGT3A1Q6NUS8 523 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 FKBP9P1Q75LS8 142 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 GLT6D1Q7Z4J2 308 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 AADATQ8N5Z0 425 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 KCNJ9Q92806 393 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 ZNF512Q96ME7 567 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 PLEKHG4BQ96PX9 1271 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 HGH1Q9BTY7 390 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 BDH2Q9BUT1 245 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 LRRC3Q9BY71 257 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 EPHX3Q9H6B9 360 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 SMPD3Q9NY59 655 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 OAZ3Q9UMX2 235 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 H7C0S8 307 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 ARNTLO00327 626 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 INPP4BO15327 924 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 INSIG1O15503 277 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 KDELR3O43731 214 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 TULP3O75386 442 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 LDLRP01130 860 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CAPGP40121 348 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 IL2P60568 153 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 CBX2Q14781 532 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
C9orf3-201ENST00000277198 GPRIN3Q6ZVF9 776 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 SYVN1Q86TM6 617 aa12.74□□□□□ -0.37
C9orf3-201ENST00000277198 HID1Q8IV36 788 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms