RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 IRAK1BP1Q5VVH5 260 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GALNT10Q86SR1 603 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 OR2T12Q8NG77 320 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 GPR152Q8TDT2 470 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 HDAC2Q92769 488 aaKnown RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SLC47A1Q96FL8 570 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SMARCD1Q96GM5 515 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 CGREF1Q99674 301 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SLX1AQ9BQ83 275 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SLC25A51Q9H1U9 297 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 ACTR8Q9H981 624 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 COMMD8Q9NX08 183 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 MIOSQ9NXC5 875 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 B3GNT3Q9Y2A9 372 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 HS3ST4Q9Y661 456 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 MYO1GB0I1T2 1018 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 PFDN6O15212 129 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 NDUFB5O43674 189 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 UGT2B4P06133 528 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 DLEU7Q6UYE1 221 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 PROSER1Q86XN7 944 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 SIDT2Q8NBJ9 832 aaKnown RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 STAG3L4Q8TBR4 150 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 METTL6Q8TCB7 284 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 MUL1Q969V5 352 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 CDCA5Q96FF9 252 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 MAF1Q9H063 256 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 MFSD1Q9H3U5 465 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
COL8A1-202ENST00000273342 TMED5Q9Y3A6 229 aa12.75□□□□□ -0.37
COL8A1-202ENST00000273342 F8W810 466 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 IRAK2O43187 625 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 OR1I1O60431 355 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 ANGPTL1O95841 491 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 ENO2P09104 434 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 TGM1P22735 817 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 GTF2E2P29084 291 aaKnown RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SERPINB1P30740 379 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SLC14A2Q15849 920 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 RFTN2Q52LD8 501 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 PLEKHG7Q6ZR37 379 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 Q6ZSR9 355 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 FRA10AC1Q70Z53 315 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 FAR1Q8WVX9 515 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 IMP4Q96G21 291 aaKnown RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 WDR12Q9GZL7 423 aaKnown RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 C6orf62Q9GZU0 229 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 MRM3Q9HC36 420 aaKnown RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 BPIFA1Q9NP55 256 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 AMBNQ9NP70 447 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SCHIP1Q9P0W5 487 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 MAGEL2Q9UJ55 1249 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 VPS4AQ9UN37 437 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 NIPSNAP2O75323 286 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 B3GALT4O96024 378 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 CAPN1P07384 714 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 MMP2P08253 660 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 MMP3P08254 477 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 MYL3P08590 195 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 TSPY1Q01534 308 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 FOXM1Q08050 763 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 NPTX1Q15818 432 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 COLEC12Q5KU26 742 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 HEATR4Q86WZ0 1026 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 MIB1Q86YT6 1006 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 SLC22A15Q8IZD6 547 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 PGBD5Q8N414 524 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 POC5Q8NA72 575 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 ZNF583Q96ND8 569 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 ZNF599Q96NL3 588 aa12.74□□□□□ -0.37
COL8A1-202ENST00000273342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 CAB39Q9Y376 341 aaPredicted RBP12.74□□□□□ -0.37
COL8A1-202ENST00000273342 PRMT5O14744 637 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 GUCA1CO95843 209 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 TBX18O95935 607 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 SLC2A4P14672 509 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 SCNN1GP51170 649 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 ISL1P61371 349 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 CRY1Q16526 586 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 PTPRNQ16849 979 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 TIGD5Q53EQ6 642 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 TIGD7Q6NT04 549 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 MRNIPQ6NTE8 343 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 LEMD2Q8NC56 503 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 OR4L1Q8NH43 312 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 OSBPL10Q9BXB5 764 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 NMUR1Q9HB89 426 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 CATSPERZQ9NTU4 200 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms