RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ADRM1Q16186 407 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
NPC1-201ENST00000269228 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 ULK2Q8IYT8 1036 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 OR2T12Q8NG77 320 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SHDQ96IW2 340 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 EBPLQ9BY08 206 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 FBXW2Q9UKT8 454 aa13.54□□□□□ -0.24
NPC1-201ENST00000269228 PIP5K1BO14986 540 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 PI15O43692 258 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 ZNF33AQ06730 810 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 TNK2Q07912 1038 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 EOGTQ5NDL2 527 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 ISLR2Q6UXK2 745 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 ZNF598Q86UK7 904 aaKnown RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 PRICKLE1Q96MT3 831 aaPredicted RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 DDX18Q9NVP1 670 aaKnown RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 DNAJC28Q9NX36 388 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 LYVE1Q9Y5Y7 322 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 MYH7P12883 1935 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 TGM5O43548 720 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 CA3P07451 260 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 ZIK1Q3SY52 487 aaPredicted RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 LRRTM3Q86VH5 581 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 ADAMTS15Q8TE58 950 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 PHF10Q8WUB8 498 aaKnown RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 ZNF607Q96SK3 696 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 TFB2MQ9H5Q4 396 aaKnown RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 FETUBQ9UGM5 382 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 BBIP1A8MTZ0 92 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 KRT36O76013 467 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 STK19P49842 368 aaPredicted RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 PTPRCAPQ14761 206 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 NRSN1Q8IZ57 195 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 REXO5Q96IC2 774 aaKnown RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 SIRPGQ9P1W8 387 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 STC2O76061 302 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 GNSP15586 552 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 FAAH2Q6GMR7 532 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 PDE12Q6L8Q7 609 aaKnown RBP13.53□□□□□ -0.24
NPC1-201ENST00000269228 ZNF544Q6NX49 715 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 AMIGO2Q86SJ2 522 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 RNPEPL1Q9HAU8 725 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 B4GALT6Q9UBX8 382 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 PCDHGA11Q9Y5H2 935 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
NPC1-201ENST00000269228 CHURC1-FNTBB4DL54 471 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 AP3D1O14617 1153 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 AHSGP02765 367 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 HIST1H2ABP04908 130 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 ITGA2P17301 1181 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 PLA2G16P53816 162 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 LMAN2Q12907 356 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 DEF8Q6ZN54 512 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 EIF3MQ7L2H7 374 aaKnown RBP13.52□□□□□ -0.24
NPC1-201ENST00000269228 HIST3H2AQ7L7L0 130 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 HIST1H2ACQ93077 130 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 MTERF1Q99551 399 aaKnown RBP13.52□□□□□ -0.24
NPC1-201ENST00000269228 FEM1AQ9BSK4 669 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 HERC2P3Q9BVR0 1158 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 MAT2BQ9NZL9 334 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 PDE9AO76083 593 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 CST1P01037 141 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 EDN1P05305 212 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 RB1P06400 928 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 ZNF30P17039 623 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 CCNFP41002 786 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 CLDN10P78369 228 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.24
NPC1-201ENST00000269228 EPHX4Q8IUS5 362 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 FBXW8Q8N3Y1 598 aa13.52□□□□□ -0.24
NPC1-201ENST00000269228 DHRS12A0PJE2 317 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 SUV39H1O43463 412 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 MAN1A2O60476 641 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 NT5EP21589 574 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 FEN1P39748 380 aaKnown RBP13.52□□□□□ -0.25
NPC1-201ENST00000269228 CLCNKAP51800 687 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 USP46P62068 366 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 AMZ1Q400G9 498 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 DCAKDQ8WVC6 231 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 EXD2Q9NVH0 621 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 ELOVL2Q9NXB9 296 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 GJD2Q9UKL4 321 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 PRPF19Q9UMS4 504 aaKnown RBP13.52□□□□□ -0.25
NPC1-201ENST00000269228 HEBP2Q9Y5Z4 205 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 CFAP20Q9Y6A4 193 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms