RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 LRRC58Q96CX6 371 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 BOCQ9BWV1 1114 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 KIAA1522Q9P206 1035 aaPredicted RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 ADGRE2Q9UHX3 823 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 FADS3Q9Y5Q0 445 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 COMMD3-BMI1R4GMX3 469 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 EI24O14681 340 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 MAN1A2O60476 641 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 CST1P01037 141 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 ESR1P03372 595 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 SMARCB1Q12824 385 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 PTGR1Q14914 329 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 PLA2G4EQ3MJ16 856 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 TRIM60Q495X7 471 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 HSF5Q4G112 596 aaPredicted RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 GPR107Q5VW38 600 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 GALNT5Q7Z7M9 940 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 OR4F6Q8NGB9 312 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 OTULINQ96BN8 352 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 PPP3R2Q96LZ3 170 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 IGFLR1Q9H665 355 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 TMA7Q9Y2S6 64 aaKnown RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 G6PDP11413 515 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 FCGR1AP12314 374 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 NAE1Q13564 534 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 GK3PQ14409 553 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 LIX1Q8N485 282 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 PANX1Q96RD7 426 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 BRD9Q9H8M2 597 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 LRTM1Q9HBL6 345 aa12.39□□□□□ -0.43
HERC6-201ENST00000264346 INTS10Q9NVR2 710 aaKnown RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 CNOT6Q9ULM6 557 aaKnown RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 FAM32AQ9Y421 112 aaKnown RBP12.39□□□□□ -0.43
HERC6-201ENST00000264346 H3BSA7 217 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 ARNTP27540 789 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SPAM1P38567 509 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 MAGEA11P43364 429 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 GNPDA1P46926 289 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 MTA1Q13330 715 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 FNDC3BQ53EP0 1204 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 RSPO2Q6UXX9 243 aaPredicted RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 CHST15Q7LFX5 561 aaPredicted RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 APCDD1Q8J025 514 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 ASB9Q96DX5 294 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 MYEOVQ96EZ4 313 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 RNF38Q9H0F5 515 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 BLOC1S6Q9UL45 172 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 MRPS23Q9Y3D9 190 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 CENPFP49454 3210 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 TNFRSF10BO14763 440 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 ADSLP30566 484 aaPredicted RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 CPOXP36551 454 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 GSK3BP49841 420 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 P3H2Q8IVL5 708 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 LSMEM2Q8N112 164 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 ARRDC2Q8TBH0 407 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SH3RF2Q8TEC5 729 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SCAMP4Q969E2 229 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 KIAA1191Q96A73 305 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 AURKBQ96GD4 344 aaPredicted RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 PAIP1Q9H074 479 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 NOL6Q9H6R4 1146 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 NDUFA13Q9P0J0 144 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 TBC1D3BA6NDS4 549 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 C5orf58C9J3I9 102 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 RFXANKO14593 260 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 KDELR3O43731 214 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 ADH1AP07327 375 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 OCA2Q04671 838 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SEMA3AQ14563 771 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 TLR1Q15399 786 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 UTP15Q8TED0 518 aaKnown RBP12.38□□□□□ -0.43
HERC6-201ENST00000264346 SORCS1Q8WY21 1168 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 PLD4Q96BZ4 506 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 IGSF21Q96ID5 467 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
HERC6-201ENST00000264346 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.37□□□□□ -0.43
HERC6-201ENST00000264346 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 NOBOXO60393 691 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 ASLP04424 464 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 HTR6P50406 440 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 LAPTM5Q13571 262 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 NADSYN1Q6IA69 706 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 RD3Q7Z3Z2 195 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 SYVN1Q86TM6 617 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 GPR180Q86V85 440 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 SH3GL1Q99961 368 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 FEM1AQ9BSK4 669 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 CHID1Q9BWS9 393 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 OSBPL11Q9BXB4 747 aa12.37□□□□□ -0.43
HERC6-201ENST00000264346 CAPN10Q9HC96 672 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms