RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SLCO6A1Q86UG4 719 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 POLR1EQ9GZS1 481 aaKnown RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 SACM1LQ9NTJ5 587 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 ADGRE2Q9UHX3 823 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 ZMYM5Q9UJ78 669 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 INVSQ9Y283 1065 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 SYCE1LA8MT33 242 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 M0QZ92 97 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 E2F6O75461 281 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CAPN1P07384 714 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 OR1E1P30953 314 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 RBM48Q5RL73 367 aaKnown RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 LETMD1Q6P1Q0 360 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 BRSK1Q8TDC3 778 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 NCLNQ969V3 563 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 ISG20Q96AZ6 181 aaKnown RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 MYEOVQ96EZ4 313 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 LINGO1Q96FE5 620 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CNDP2Q96KP4 475 aaKnown RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 BPIFA1Q9NP55 256 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 ZIM2Q9NZV7 527 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 VAPAQ9P0L0 249 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CPQQ9Y646 472 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 LCHNA4D1U4 455 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 IQCF5A8MTL0 148 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 TNFRSF10BO14763 440 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 PARNO95453 639 aaKnown RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 DNASE1L3Q13609 305 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 TUBA3CQ13748 450 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CRY1Q16526 586 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 TTC23Q5W5X9 447 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CYP20A1Q6UW02 462 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 SLC16A12Q6ZSM3 486 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 GPSM1Q86YR5 675 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CFAP52Q8N1V2 620 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 OR2T12Q8NG77 320 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CNIH3Q8TBE1 160 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 FAM162AQ96A26 154 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 ALPK1Q96QP1 1244 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 NUSAP1Q9BXS6 441 aaKnown RBP17.23■□□□□ 0.35
TRAM1-201ENST00000262213 PALMDQ9NP74 551 aa17.23■□□□□ 0.35
TRAM1-201ENST00000262213 CLDN25C9JDP6 229 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 KPNA4O00629 521 aaPredicted RBP17.22■□□□□ 0.35
TRAM1-201ENST00000262213 GPR39O43194 453 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 TULP3O75386 442 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 MLYCDO95822 493 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 FGF1P05230 155 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 GRK4P32298 578 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 HPCAL1P37235 193 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 MAPK11Q15759 364 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 GALNT5Q7Z7M9 940 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 THEM5Q8N1Q8 247 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 GPR150Q8NGU9 434 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 ZFP90Q8TF47 636 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 HDAC2Q92769 488 aaKnown RBP17.22■□□□□ 0.35
TRAM1-201ENST00000262213 FKBP10Q96AY3 582 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 SLC47A1Q96FL8 570 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 MAGED4Q96JG8 741 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 PKMYT1Q99640 499 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 CCL15-CCL14A0A0B4J2E2 113 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 GGT1P19440 569 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 OXCT1P55809 520 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 GRB14Q14449 540 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 PTGR1Q14914 329 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 LAPTM4AQ15012 233 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 CCL15Q16663 113 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 CCDC81Q6ZN84 652 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 ZNF583Q96ND8 569 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 ZNF347Q96SE7 839 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 ZBED2Q9BTP6 218 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 ACTL8Q9H568 366 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 ACTR8Q9H981 624 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 TMEM248Q9NWD8 314 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 PAK1IP1Q9NWT1 392 aaPredicted RBP17.22■□□□□ 0.35
TRAM1-201ENST00000262213 MTRRQ9UBK8 725 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 DOCK3Q8IZD9 2030 aa17.22■□□□□ 0.35
TRAM1-201ENST00000262213 PRKD3O94806 890 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 HLA-DPA1P20036 260 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 OGNP20774 298 aaKnown RBP17.21■□□□□ 0.35
TRAM1-201ENST00000262213 ACVR1Q04771 509 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 FPGSQ05932 587 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 AP5B1Q2VPB7 878 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 PGS1Q32NB8 556 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 RFTN2Q52LD8 501 aaPredicted RBP17.21■□□□□ 0.35
TRAM1-201ENST00000262213 GLT6D1Q7Z4J2 308 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 PLEKHH3Q7Z736 793 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 TMEM179BQ7Z7N9 219 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 NODALQ96S42 347 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 HEPHQ9BQS7 1158 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 IKZF5Q9H5V7 419 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 POPDC3Q9HBV1 291 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 POLE4Q9NR33 117 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 TRMT6Q9UJA5 497 aaKnown RBP17.21■□□□□ 0.35
TRAM1-201ENST00000262213 TLR6Q9Y2C9 796 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 MYO16Q9Y6X6 1858 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 WASH4PA8MWX3 477 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 CYP4B1P13584 511 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 SLC2A4P14672 509 aa17.21■□□□□ 0.35
TRAM1-201ENST00000262213 RPL9P32969 192 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms