RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 AHCYL1O43865 530 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 DNAJB6O75190 326 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CYP11A1P05108 521 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TACSTD2P09758 323 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SSTR3P32745 418 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 GLRBP48167 497 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CLCN4P51793 760 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TUBA1BP68363 451 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TUBA4AP68366 448 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TREML2Q5T2D2 321 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ESRP1Q6NXG1 681 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TUBA1AQ71U36 451 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 OR4C15Q8NGM1 316 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CNPPD1Q9BV87 410 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 AK5Q9Y6K8 562 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ELOVL7A1L3X0 281 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 HTR3EA5X5Y0 456 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 H3BN98 237 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MPC1LP0DKB6 136 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TSPAN8P19075 237 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 OASLQ15646 514 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MANEALQ5VSG8 457 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 AMZ2Q86W34 360 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 GKN2Q86XP6 184 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 FAM20CQ8IXL6 584 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PQLC1Q8N2U9 271 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 OR2T12Q8NG77 320 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 EEF1AKMT1Q8WVE0 214 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 NUAK2Q9H093 628 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ZNHIT2Q9UHR6 403 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ASF1AQ9Y294 204 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CST5P28325 142 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MANFP55145 182 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MPP1Q00013 466 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 UGCGQ16739 394 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 RBM20Q5T481 1227 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 DEFB132Q7Z7B7 95 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 STK32CQ86UX6 486 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IRF2BP1Q8IU81 584 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 GEMIN6Q8WXD5 167 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ISG20Q96AZ6 181 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 NELL2Q99435 816 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 EPB41L1Q9H4G0 881 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IL1RL2Q9HB29 575 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KNL1Q8NG31 2342 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 KDELR3O43731 214 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PDE5AO76074 875 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PSMA1P25786 263 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CRATP43155 626 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BLVRAP53004 296 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SEC24CP53992 1094 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BTKQ06187 659 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ASTE1Q2TB18 679 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 HACD2Q6Y1H2 254 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 C3P1Q6ZMU1 363 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 OR4A15Q8NGL6 344 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SETD7Q8WTS6 366 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 DPYSL5Q9BPU6 564 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TRIM8Q9BZR9 551 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SGK2Q9HBY8 427 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 GPATCH2LQ9NWQ4 482 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 GNEQ9Y223 722 aaKnown RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 A0A1W2PQ45 241 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 A0A1W2PQY0 241 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 MAPK3P27361 379 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SLC16A1P53985 500 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CCNYL2Q5T2Q4 361 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM164Q5U3C3 297 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 NUDT13Q86X67 352 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CHPFQ8IZ52 775 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 OFCC1Q8IZS5 231 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 FUKQ8N0W3 1084 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TRPV3Q8NET8 790 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BTN2A2Q8WVV5 523 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CMTM7Q96FZ5 175 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ACTL8Q9H568 366 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SOHLH2Q9NX45 425 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TAS2R7Q9NYW3 318 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CCDC167Q9P0B6 97 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM59LQ9UK28 342 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IKZF3Q9UKT9 509 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 LRP5O75197 1615 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 F5H423 210 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF432O94892 652 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PRG2P13727 222 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CTPS1P17812 591 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 IMPDH1P20839 514 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 BMP6P22004 513 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CACNA2D1P54289 1103 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 TAS2R41P59536 307 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SLC10A6Q3KNW5 377 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 LIPJQ5W064 366 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 OR5B17Q8NGF7 314 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 SMPDL3AQ92484 453 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CPXM1Q96SM3 734 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ERVK-5Q9HDB9 667 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 CREBZFQ9NS37 354 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 ELOVL2Q9NXB9 296 aa4.26□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHB9Q9Y5E1 797 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms