RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 EMC9Q9Y3B6 208 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 MAGED1Q9Y5V3 778 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 IRAK3Q9Y616 596 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ATRNL1Q5VV63 1379 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 TET3O43151 1660 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 PREX1Q8TCU6 1659 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 E7EQ34 232 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 RECQL5O94762 991 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 OXSR1O95747 527 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 EDN1P05305 212 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CTSAP10619 480 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ZNF37AP17032 561 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 NDUFV2P19404 249 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ADRA1DP25100 572 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SLC6A6P31641 620 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 PLK1P53350 603 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 RABGGTBP53611 331 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ATP12AP54707 1039 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 RAB15P59190 212 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 NFKB2Q00653 900 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 FASTKD3Q14CZ7 662 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 TLR1Q15399 786 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SEC23BQ15437 767 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CRY2Q49AN0 593 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 FAM180BQ6P0A1 224 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SLC39A4Q6P5W5 647 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 GK5Q6ZS86 529 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ERN2Q76MJ5 926 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 C14orf80Q86SX3 495 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 KATNAL2Q8IYT4 538 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ZCCHC9Q8N567 271 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 FNDC5Q8NAU1 212 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 AGR3Q8TD06 166 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 BOD1Q96IK1 185 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CNDP2Q96KP4 475 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 MCMBPQ9BTE3 642 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 MKKSQ9NPJ1 570 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 AGPAT5Q9NUQ2 364 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 MS4A12Q9NXJ0 267 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 EMC3Q9P0I2 261 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 LRRC7Q96NW7 1537 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ELOA3DA6NLF2 546 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 UPK3BL1B0FP48 263 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 UPK3BL2E5RIL1 263 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 TULP2O00295 520 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 RNGTTO60942 597 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 KHDRBS3O75525 346 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 TSHRP16473 764 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CTPS1P17812 591 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 PGAM1P18669 254 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 HNRNPA2B1P22626 353 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 GP5P40197 560 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 KCNJ1P48048 391 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CCR8P51685 355 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 AFF3P51826 1226 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 SLC5A3P53794 718 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CYP4F2P78329 520 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CYP4F3Q08477 520 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 EIF3IQ13347 325 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 PLGLAQ15195 96 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 PTPRNQ16849 979 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ELOA3BQ3SY89 546 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 GPR33Q49SQ1 333 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 FLYWCH1Q4VC44 716 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 HYIQ5T013 277 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SHC4Q6S5L8 630 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SV2AQ7L0J3 742 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 SYVN1Q86TM6 617 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 FAM126BQ8IXS8 530 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CADM2Q8N3J6 435 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 PIK3C3Q8NEB9 887 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 VN1R2Q8NFZ6 395 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 ELOA3Q8NG57 546 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 OR9K2Q8NGE7 335 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 OR2T34Q8NGX1 318 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 NDNFQ8TB73 568 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 NELL1Q92832 810 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SUSD3Q96L08 255 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 TRNT1Q96Q11 434 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 DESI2Q9BSY9 194 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 NPLQ9BXD5 320 aaPredicted RBP3.99□□□□□ -1.77
RNF38-201ENST00000259605 SLC19A3Q9BZV2 496 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 AMBRA1Q9C0C7 1298 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SLC6A16Q9GZN6 736 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SUV39H2Q9H5I1 410 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 RETREG1Q9H6L5 497 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 EFCAB1Q9HAE3 211 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 NOD2Q9HC29 1040 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 IL1RAPQ9NPH3 570 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SPHK2Q9NRA0 654 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 HRASLS2Q9NWW9 162 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 SPATA7Q9P0W8 599 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 FZD1Q9UP38 647 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 BTBD3Q9Y2F9 522 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 TELO2Q9Y4R8 837 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 WNT6Q9Y6F9 365 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 MBD5Q9P267 1494 aa3.99□□□□□ -1.77
RNF38-201ENST00000259605 CYP3A7-CYP3A51PA0A087WV96 503 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms