RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TBC1D3IA0A087WXS9 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3EA0A087X179 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3KA0A087X1G2 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 KANSL1LA0AUZ9 987 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3FA6NER0 549 aaPredicted RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 PRR23AA6NEV1 266 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3LB9A6J9 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 NUAK1O60285 661 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 NPHS1O60500 1241 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 RNGTTO60942 597 aaKnown RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 LILRB5O75023 590 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 GPC4O75487 556 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 SLCO2B1O94956 709 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 SNUPNO95149 360 aaKnown RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3HP0C7X1 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 SERPINB5P36952 375 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 CDK3Q00526 305 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 HSPA14Q0VDF9 509 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 SF3A3Q12874 501 aaKnown RBP eCLIP9.3□□□□□ -0.923e-7■■■□□ 16.9
NIP7-202ENST00000254941 TGFBIQ15582 683 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 PPP1R3AQ16821 1122 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 BCL7AQ4VC05 210 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3GQ6DHY5 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3CQ6IPX1 549 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 FOXR1Q6PIV2 292 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TMEM220Q6QAJ8 160 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 ZNF771Q7L3S4 317 aaPredicted RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 TRIM74Q86UV6 250 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 HEATR4Q86WZ0 1026 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 GPSM1Q86YR5 675 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TBC1D3Q8IZP1 549 aaPredicted RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 TP53I13Q8NBR0 393 aaPredicted RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 ASB12Q8WXK4 309 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 MOCOSQ96EN8 888 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 CNDP1Q96KN2 507 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 CCM2Q9BSQ5 444 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 C1QTNF7Q9BXJ2 289 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TEX101Q9BY14 249 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 OSBPL6Q9BZF3 934 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 OR2AG1Q9H205 316 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 CD93Q9NPY3 652 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 ITM2CQ9NQX7 267 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 MBNL1Q9NR56 388 aaKnown RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 USP36Q9P275 1121 aaKnown RBP9.3□□□□□ -0.92
NIP7-202ENST00000254941 ATXN10Q9UBB4 475 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 FBXL21Q9UKT6 434 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 TMCO1Q9UM00 188 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 GPR34Q9UPC5 381 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 CDYLQ9Y232 598 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 ARL2BPQ9Y2Y0 163 aa9.3□□□□□ -0.92
NIP7-202ENST00000254941 NCOR1O75376 2440 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 EBAG9O00559 213 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 HSPA4LO95757 839 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 IGLV3-19P01714 112 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 PCCBP05166 539 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 CHRNGP07510 517 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 GFAPP14136 432 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 ACSL1P33121 698 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 HK3P52790 923 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 GALNT1Q10472 559 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 BOP1Q14137 746 aaKnown RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 GAS6Q14393 721 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 INPP5AQ14642 412 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 UBXN2BQ14CS0 331 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 IRF4Q15306 451 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 PFKFB4Q16877 469 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 ZNF658BQ4V348 819 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 ARL13AQ5H913 290 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 CFAP157Q5JU67 520 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 ZNF678Q5SXM1 525 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 NEK10Q6ZWH5 1172 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 FAM124AQ86V42 546 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 LSMEM2Q8N112 164 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 FBXO39Q8N4B4 442 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 CCNYL1Q8N7R7 359 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 PTGR2Q8N8N7 351 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 FLCNQ8NFG4 579 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 RFWD2Q8NHY2 731 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 C10orf82Q8WW14 230 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 HMGB4Q8WW32 186 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 ELMO1Q92556 727 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 EXT2Q93063 718 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 THOC1Q96FV9 657 aaKnown RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 LINC00615Q96LM1 132 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 PLCD4Q9BRC7 762 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 TRMOQ9BU70 441 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 LGR4Q9BXB1 951 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 FAM126AQ9BYI3 521 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 BTBD1Q9H0C5 482 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 ILKAPQ9H0C8 392 aaPredicted RBP9.29□□□□□ -0.92
NIP7-202ENST00000254941 KCNK13Q9HB14 408 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 ACSS2Q9NR19 701 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 THEGQ9P2T0 379 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 GULP1Q9UBP9 304 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 EBF1Q9UH73 591 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 HAO1Q9UJM8 370 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 OARD1Q9Y530 152 aa9.29□□□□□ -0.92
NIP7-202ENST00000254941 CEP192Q8TEP8 1941 aa9.28□□□□□ -0.92
NIP7-202ENST00000254941 PLXND1Q9Y4D7 1925 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms